RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PRR14Q9BWN1 585 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 C20orf27Q9GZN8 174 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 TUBB1Q9H4B7 451 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 ZCCHC3Q9NUD5 404 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 PAQR5Q9NXK6 330 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 NTMQ9P121 344 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 BAIAP2L1Q9UHR4 511 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 EIF3LQ9Y262 564 aaKnown RBP9.42□□□□□ -0.9
NR1I3-222ENST00000506018 SNX8Q9Y5X2 465 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 AP4B1Q9Y6B7 739 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 USH1CQ9Y6N9 552 aa9.42□□□□□ -0.9
NR1I3-222ENST00000506018 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 A0A087WZY1 265 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 GOLGA8QA0A0J9YX86 632 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 A0A1W2PRB8 838 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 GXYLT2A0PJZ3 443 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 GOLGA8OA6NCC3 632 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 TMEM233B4DJY2 109 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ALG1L2C9J202 215 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 GOLGA8NF8WBI6 632 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 H3BML4 177 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 SCDO00767 359 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 MSTNO14793 375 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 SEC14L5O43304 696 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 PEX11AO75192 247 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 SMNDC1O75940 238 aaKnown RBP eCLIP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 NGFRP08138 427 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF17P17021 662 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 PRPS1L1P21108 318 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ATP6V1C1P21283 382 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 DRD4P21917 467 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 CPOXP36551 454 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF41P51814 821 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ARFIP2P53365 341 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 B3GALT5-AS1P59052 145 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 POU6F2P78424 691 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 FOXF2Q12947 444 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 TP53BP2Q13625 1128 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 SPDYE7PQ495Y7 208 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF385BQ569K4 471 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 MFSD12Q6NUT3 480 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 CNEP1R1Q8N9A8 125 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF527Q8NB42 609 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 OR56A1Q8NGH5 318 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 MOAP1Q96BY2 351 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 DACH2Q96NX9 599 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 STACQ99469 402 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ELAC2Q9BQ52 826 aaKnown RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 PINK1Q9BXM7 581 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 PRRG4Q9BZD6 226 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 NEUROD4Q9HD90 331 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 NPHS2Q9NP85 383 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 FANCFQ9NPI8 374 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 UBQLN4Q9NRR5 601 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 PNPOQ9NVS9 261 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 GALNT8Q9NY28 637 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 MARCOQ9UEW3 520 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ATP6V1HQ9UI12 483 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ST6GALNAC2Q9UJ37 374 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 FAF1Q9UNN5 650 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-222ENST00000506018 TRIM33Q9UPN9 1127 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ZNF175Q9Y473 711 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 ABCA4P78363 2273 aa9.41□□□□□ -0.9
NR1I3-222ENST00000506018 IGLV3-32A0A0A0MS00 114 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 A0A0G2JND7 137 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 A0A1W2PNV4 684 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 OR2M5A3KFT3 312 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 FAM221AA4D161 298 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 H3BNH8 94 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 CFLARO15519 480 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 SNX3O60493 162 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 KCNK2O95069 426 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 OXSR1O95747 527 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 TBXA2RP21731 343 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 ME2P23368 584 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 IST1P53990 364 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 AQP5P55064 265 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 IRX1P78414 480 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 GABPB1Q06547 395 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 TESK1Q15569 626 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 PDCD2Q16342 344 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 UGT3A2Q3SY77 523 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 XKR7Q5GH72 579 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 C6orf136Q5SQH8 315 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 PDSS1Q5T2R2 415 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 PPP4R4Q6NUP7 873 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 CAMKMTQ7Z624 323 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 SLC16A11Q8NCK7 471 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 LINC01560Q8TB33 94 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 FBXO30Q8TB52 745 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 ADAMTS15Q8TE58 950 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 OR5P2Q8WZ92 322 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 SMPDL3BQ92485 455 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 HOXB13Q92826 284 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-222ENST00000506018 ZBTB8AQ96BR9 441 aa9.4□□□□□ -0.9
NR1I3-222ENST00000506018 FAM120BQ96EK7 910 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms