RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 DIRAS1O95057 198 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 HOXB2P14652 356 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 BDKRB1P46663 353 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 UCNP55089 124 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CLDN20P56880 219 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TPBGQ13641 420 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 DOC2BQ14184 412 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 NFATC4Q14934 902 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ZBTB6Q15916 424 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM249Q2WGJ8 235 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TP53I3Q53FA7 332 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 GGNBP1Q5YKI7 109 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ARMCX5Q6P1M9 558 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 PLEKHG7Q6ZR37 379 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CDHR3Q6ZTQ4 885 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 SYT14Q8NB59 555 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 MDS2Q8NDY4 140 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 OR4K1Q8NGD4 311 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 OR5R1Q8NH85 324 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 METTL2AQ96IZ6 378 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 UHRF2Q96PU4 802 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 C12orf10Q9HB07 376 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 APOBEC3BQ9UH17 382 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 UBN2Q6ZU65 1347 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 FAM74A7A6NL05 159 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 RPP14O95059 124 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 WNT1P04628 370 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ALDOBP05062 364 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 RNH1P13489 461 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 MSNP26038 577 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 ZFP36P26651 326 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 HCAR3P49019 387 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CRISP1P54107 249 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 VLDLRP98155 873 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 SULT2A1Q06520 285 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 FAM74A3Q4VXF1 159 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 AGAP7PQ5VUJ5 663 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM139Q8IV31 216 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 GSPT2Q8IYD1 628 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 OR56A4Q8NGH8 313 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 WDR36Q8NI36 951 aaKnown RBP4.7□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM37Q8WXS4 190 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 MYDGFQ969H8 173 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 AGAP4Q96P64 663 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 NDUFAF3Q9BU61 184 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 GALNT9Q9HCQ5 603 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 AKIP1Q9NQ31 210 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 HS3ST3A1Q9Y663 406 aa4.7□□□□□ -1.66
NIPBL-204ENST00000504430 CENPBD1B2RD01 187 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RBMXL2O75526 392 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 NXPH2O95156 264 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 NDUFA7O95182 113 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 POLR2EP19388 210 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RAD51Q06609 339 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 KLRC3Q07444 240 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TAF1AQ15573 450 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 KCNMB1Q16558 191 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 KLHL38Q2WGJ6 581 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 GPR141Q7Z602 305 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC26A11Q86WA9 606 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC13A5Q86YT5 568 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 DND1Q8IYX4 353 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 GATSQ8NAP1 163 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 OLIG1Q8TAK6 271 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ESR2Q92731 530 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC25A36Q96CQ1 311 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SPRTNQ9H040 489 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 GBA3Q9H227 469 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ZCCHC4Q9H5U6 513 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RANBP3Q9H6Z4 567 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RRAGDQ9NQL2 400 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 FNDC1Q4ZHG4 1894 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 C5orf60A6NFR6 353 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RHODO00212 210 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 PAPSS2O95340 614 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ETHE1O95571 254 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 KRT7P08729 469 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 FCARP24071 287 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SLC1A4P43007 532 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 PCYT1AP49585 367 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 C2orf54Q08AI8 447 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 TSPAN31Q12999 210 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CYTH1Q15438 398 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ZCWPW2Q504Y3 356 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 APOBEC3HQ6NTF7 200 aaKnown RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SSX9Q7RTT3 188 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 RANBP3LQ86VV4 465 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF761Q86XN6 746 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 DTX1Q86Y01 620 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CCDC50Q8IVM0 306 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SYS1Q8N2H4 156 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CNBD1Q8NA66 436 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 OR7G2Q8NG99 324 aa4.69□□□□□ -1.66
NIPBL-204ENST00000504430 CIDECQ96AQ7 238 aaPredicted RBP4.69□□□□□ -1.66
NIPBL-204ENST00000504430 SERPINB11Q96P15 392 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms