RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 KCNE5Q9UJ90 142 aa17.71■□□□□ 0.43
TRIM41-203ENST00000503114 NCKAP1Q9Y2A7 1128 aa17.71■□□□□ 0.43
TRIM41-203ENST00000503114 MRPS2Q9Y399 296 aaKnown RBP17.71■□□□□ 0.43
TRIM41-203ENST00000503114 SHISA3A0PJX4 238 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 RASGRP1O95267 797 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 EGFP01133 1207 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 KRT8P05787 483 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 MAKP20794 623 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 TBXA2RP21731 343 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PBX2P40425 430 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 MAP3K8P41279 467 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 IFITM2Q01629 132 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 ID2Q02363 134 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 GPR18Q14330 331 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 OR1Q1Q15612 314 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 SLC35F1Q5T1Q4 408 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 NIPAL3Q6P499 406 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 METAP1DQ6UB28 335 aaPredicted RBP17.7■□□□□ 0.42
TRIM41-203ENST00000503114 CDRT4Q8N9R6 151 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 SYNDIG1Q9H7V2 258 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 ADAP2Q9NPF8 381 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 MEIOCA2RUB1 952 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 CDHR4A6H8M9 788 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 FGF17O60258 216 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 CFL1P23528 166 aaKnown RBP17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PTBP1P26599 531 aaKnown RBP eCLIP17.7■□□□□ 0.42
TRIM41-203ENST00000503114 DDOSTP39656 456 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PYDC2Q56P42 97 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PRR23CQ6ZRP0 262 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 LNX2Q8N448 690 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 ATP6V1C2Q8NEY4 427 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 OR52L1Q8NGH7 329 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PFN4Q8NHR9 129 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 NEIL3Q8TAT5 605 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 TMEM239Q8WW34 195 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 HS6ST2Q96MM7 605 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 CD180Q99467 661 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 HDHD5Q9BXW7 423 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 PPP1R3EQ9H7J1 279 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 TBC1D17Q9HA65 648 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 CD93Q9NPY3 652 aa17.7■□□□□ 0.42
TRIM41-203ENST00000503114 OR6C74A6NCV1 312 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 ZNF860A6NHJ4 632 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 FAM183AA6NL82 134 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 H0YGG7 62 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 RFXAPO00287 272 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 CYR61O00622 381 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 HCN1O60741 890 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 AK1P00568 194 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 GKN3PP0CG01 181 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PTNP21246 168 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 HNRNPA2B1P22626 353 aaKnown RBP17.69■□□□□ 0.42
TRIM41-203ENST00000503114 ARF3P61204 181 aaPredicted RBP17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PRICKLE4Q2TBC4 344 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PLBD1Q6P4A8 553 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 TMEM91Q6ZNR0 172 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 MEPCEQ7L2J0 689 aaKnown RBP17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PRSS41Q7RTY9 318 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 COX18Q8N8Q8 333 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 TMEM52Q8NDY8 209 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 OR51G2Q8NGK0 314 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 OR10G6Q8NH81 332 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PMM1Q92871 262 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 ST6GAL2Q96JF0 529 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 DEPDC7Q96QD5 511 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 PHOX2BQ99453 314 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 C20orf141Q9NUB4 165 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 EVA1BQ9NVM1 165 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 FBXO34Q9NWN3 711 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 COMMD3Q9UBI1 195 aa17.69■□□□□ 0.42
TRIM41-203ENST00000503114 RBMX2Q9Y388 322 aaKnown RBP17.69■□□□□ 0.42
TRIM41-203ENST00000503114 LRRC72A6NJI9 287 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 PEX12O00623 359 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 PLA2G10O15496 165 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 LDB3O75112 727 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 ATP6V1E1P36543 226 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 SRP54P61011 504 aaKnown RBP17.68■□□□□ 0.42
TRIM41-203ENST00000503114 MGAT2Q10469 447 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 RIN1Q13671 783 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 ALG11Q2TAA5 492 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 GARNL3Q5VVW2 1013 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 RPL13AP3Q6NVV1 102 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 CNIH2Q6PI25 160 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 RNF44Q7L0R7 432 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 KLBQ86Z14 1044 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 VWA5B2Q8N398 1253 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 ACBD7Q8N6N7 88 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 ZFPM2Q8WW38 1151 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 FAM3CQ92520 227 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 KISS1RQ969F8 398 aaPredicted RBP17.68■□□□□ 0.42
TRIM41-203ENST00000503114 RERGQ96A58 199 aaPredicted RBP17.68■□□□□ 0.42
TRIM41-203ENST00000503114 TIMP4Q99727 224 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 RNF32Q9H0A6 362 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 MMP28Q9H239 520 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 TMEM165Q9HC07 324 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 CLDND1Q9NY35 253 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 MAT2BQ9NZL9 334 aa17.68■□□□□ 0.42
TRIM41-203ENST00000503114 NDRG2Q9UN36 371 aaKnown RBP17.68■□□□□ 0.42
TRIM41-203ENST00000503114 N6AMT1Q9Y5N5 214 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms