RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SLC43A2Q8N370 569 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 EIF1ADQ8N9N8 165 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MNS1Q8NEH6 495 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TOR1AIP2Q8NFQ8 470 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 OR2V1Q8NHB1 315 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ZFP28Q8NHY6 868 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MZB1Q8WU39 189 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FBXW5Q969U6 566 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TRMT61AQ96FX7 289 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PERPQ96FX8 193 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 RADILQ96JH8 1075 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MS4A4EQ96PG1 132 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MDFIQ99750 246 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 CCT7Q99832 543 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TRMOQ9BU70 441 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PRRG4Q9BZD6 226 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 KLHL4Q9C0H6 718 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ACTR6Q9GZN1 396 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 ESRP2Q9H6T0 727 aaKnown RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 BCO1Q9HAY6 547 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 MED17Q9NVC6 651 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM160Q9NX00 188 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FLRT3Q9NZU0 649 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 KLHL13Q9P2N7 655 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PSMC3IPQ9P2W1 217 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 PRDM4Q9UKN5 801 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 TIMM22Q9Y584 194 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 GPC6Q9Y625 555 aaPredicted RBP5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 FREM1Q5H8C1 2179 aa5.45□□□□□ -1.54
LSM3P4-201ENST00000502948 RTTNQ86VV8 2226 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 A0A0J9YW62 118 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 TRIM64A6NGJ6 449 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 TRIM64BA6NI03 449 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 C17orf51A8MQB3 221 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF724A8MTY0 619 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 KIAA1324LA8MWY0 1029 aaPredicted RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 INAFM1C9JVW0 142 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC28A1O00337 649 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 UBFD1O14562 309 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PDPK1O15530 556 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 RIPK2O43353 540 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 RGS14O43566 566 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 CD5LO43866 347 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PRKD3O94806 890 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 KCNK2O95069 426 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PGM3O95394 542 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 NTN1O95631 604 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 IGKV1D-16P01601 117 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 KRT16P08779 473 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 NEFHP12036 1026 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 FKBP2P26885 142 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 CRHR1P34998 444 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 CCT5P48643 541 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PRIM2P49643 509 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 P2RX1P51575 399 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF41P51814 821 aaPredicted RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 MANFP55145 182 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 FOXA1P55317 472 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ATP5J2P56134 94 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 RAC3P60763 192 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SIRPAP78324 504 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC18A2Q05940 514 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ITGADQ13349 1161 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PDK3Q15120 406 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF239Q16600 458 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 NRF1Q16656 503 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 IMPG1Q17R60 797 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SPDYAQ5MJ70 313 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 TMEM201Q5SNT2 666 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SH2D4BQ5SQS7 431 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 TEX35Q5T0J7 233 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 UBAP2Q5T6F2 1119 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 MFSD12Q6NUT3 480 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PODNL1Q6PEZ8 512 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 CSPG4Q6UVK1 2322 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 SEZ6L2Q6UXD5 910 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 TFAP2EQ6VUC0 442 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZYG11AQ6WRX3 759 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 Q6ZSR9 355 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 Q6ZT83 130 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 R3HCC1LQ7Z5L2 792 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 DTX2Q86UW9 622 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 HIPK1Q86Z02 1210 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 LILRA2Q8N149 483 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF527Q8NB42 609 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 OR4C3Q8NH37 302 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 LILRB1Q8NHL6 650 aaPredicted RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PIWIL2Q8TC59 973 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 GPR151Q8TDV0 419 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 MOAP1Q96BY2 351 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PLPPR2Q96GM1 343 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 REXO5Q96IC2 774 aaKnown RBP5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 MRGPRX4Q96LA9 322 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 KLHL15Q96M94 604 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 KCNA7Q96RP8 456 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 BTBD2Q9BX70 525 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 POTEKPQ9BYX7 375 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 PIGUQ9H490 435 aa5.44□□□□□ -1.54
LSM3P4-201ENST00000502948 REEP4Q9H6H4 257 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms