RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 THUMPD2Q9BTF0 503 aaKnown RBP1.72□□□□□ -2.13
RBM39-242ENST00000498280 WDR76Q9H967 626 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 COG4Q9H9E3 785 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 MEAF6Q9HAF1 191 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 POLD4Q9HCU8 107 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 PAK1IP1Q9NWT1 392 aaPredicted RBP1.72□□□□□ -2.13
RBM39-242ENST00000498280 VNN3Q9NY84 501 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 CHRNA9Q9UGM1 479 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 CYTH4Q9UIA0 394 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 CRLS1Q9UJA2 301 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 ANAPC7Q9UJX3 599 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 SMC3Q9UQE7 1217 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 USP16Q9Y5T5 823 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 CARMIL1Q5VZK9 1371 aa1.72□□□□□ -2.13
RBM39-242ENST00000498280 IGLV8-61A0A075B6I0 122 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 OR6C65A6NJZ3 312 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 FCN1O00602 326 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 TNFSF11O14788 317 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 MAPK13O15264 365 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 CTAGE5O15320 804 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 TRIM3O75382 744 aaPredicted RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 GPX5O75715 221 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 NEBLO76041 1014 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 TM7SF2O76062 418 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 B3GAT3O94766 335 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 F10P00742 488 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 OPN1LWP04000 364 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 CSF2P04141 144 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 IGF1P05019 195 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 HEXBP07686 556 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ASNSP08243 561 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 HBQ1P09105 142 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 P0C879 139 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 BCKDHAP12694 445 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 KRT13P13646 458 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ATP5A1P25705 553 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 PRKAR2BP31323 418 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 HPDP32754 393 aaPredicted RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 KIF5BP33176 963 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 OR3A4PP47883 348 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 STARP49675 285 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 HNRNPA3P51991 378 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 RPS8P62241 208 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 RPL32P62910 135 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 EWSR1Q01844 656 aaKnown RBP eCLIP1.71□□□□□ -2.14
RBM39-242ENST00000498280 CNTN2Q02246 1040 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 BDH1Q02338 343 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 KLHL30Q0D2K2 578 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ATXN7L3Q14CW9 347 aaPredicted RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 KIAA0040Q15053 153 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 CCDC57Q2TAC2 916 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 TTC31Q49AM3 519 aaPredicted RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 PRR30Q53SZ7 412 aaPredicted RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 DNAJC21Q5F1R6 531 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 C9orf129Q5T035 196 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 DCST2Q5T1A1 773 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 NCR3LG1Q68D85 454 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ACSM5Q6NUN0 579 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ARMCX2Q7L311 632 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 SERPINA9Q86WD7 417 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 APOBEC3FQ8IUX4 373 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 UBQLNLQ8IYU4 475 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 BADQ92934 168 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 FAF2Q96CS3 445 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 SLC25A38Q96DW6 304 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 CNOT6LQ96LI5 555 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 KIR2DL4Q99706 377 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 MAPKAP1Q9BPZ7 522 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 FEM1AQ9BSK4 669 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 CAB39LQ9H9S4 337 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 PALMDQ9NP74 551 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 SLC35D1Q9NTN3 355 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ANAPC11Q9NYG5 84 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 MRPL39Q9NYK5 338 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 SPRR3Q9UBC9 169 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 B4GALT7Q9UBV7 327 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 APOBEC3BQ9UH17 382 aaKnown RBP1.71□□□□□ -2.14
RBM39-242ENST00000498280 KLHL21Q9UJP4 597 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 LAMP5Q9UJQ1 280 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 PPIAL4AQ9Y536 164 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 FLVCR1Q9Y5Y0 555 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 AP1M2Q9Y6Q5 423 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 KIF25-AS1Q9Y6Z4 181 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 ANKRD30BQ9BXX2 1392 aa1.71□□□□□ -2.14
RBM39-242ENST00000498280 SF3B1O75533 1304 aaKnown RBP eCLIP1.7□□□□□ -2.147e-7■□□□□ 9.5
RBM39-242ENST00000498280 PPIAL4CA0A0B4J2A2 164 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 E7ENQ6 273 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 H3BMQ9 156 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 K7ENP7 123 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 CLDN5O00501 218 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 OR7A17O14581 309 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 OR1F1O43749 312 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 PEX11AO75192 247 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 UFL1O94874 794 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 GUCA1CO95843 209 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 LY6G6DO95868 133 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 PCCBP05166 539 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 TSPY4P0CV99 314 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 TSPY10P0CW01 314 aa1.7□□□□□ -2.14
RBM39-242ENST00000498280 PPIAL4GP0DN37 164 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms