RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 C1orf52Q8N6N3 182 aaKnown RBP11.18□□□□□ -0.62
TRIM27-207ENST00000498117 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
TRIM27-207ENST00000498117 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 SELENOMQ8WWX9 145 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 PIMREGQ9BSJ6 248 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 C3orf14Q9HBI5 128 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 TENM1Q9UKZ4 2725 aa11.18□□□□□ -0.62
TRIM27-207ENST00000498117 A0A087WV62 115 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 A0A1W2PRB8 838 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 ESYT3A0FGR9 886 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SLITRK5O94991 958 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 PDYNP01213 254 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 IL3P08700 152 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 DHRS4L1P0CG22 281 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 COL6A2P12110 1019 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 GGT1P19440 569 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SRP14P37108 136 aaKnown RBP11.17□□□□□ -0.62
TRIM27-207ENST00000498117 NR4A2P43354 598 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 ZNF41P51814 821 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-207ENST00000498117 TRAF3Q13114 568 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 HEPACAMQ14CZ8 416 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 PLPPR5Q32ZL2 321 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 GGTA1PQ4G0N0 100 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 KLHL17Q6TDP4 642 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SLC43A2Q8N370 569 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 PPM1NQ8N819 430 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 ZFAND2BQ8WV99 257 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SLC9A6Q92581 669 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 C3orf49Q96BT1 292 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 BBS4Q96RK4 519 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 NPAS1Q99742 590 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SHCBP1LQ9BZQ2 653 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 TRIM31Q9BZY9 425 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 FARSBQ9NSD9 589 aaKnown RBP11.17□□□□□ -0.62
TRIM27-207ENST00000498117 MED17Q9NVC6 651 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 NPAP1Q9NZP6 1156 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 VPS29Q9UBQ0 182 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 MCM8Q9UJA3 840 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 NFU1Q9UMS0 254 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 SNX6Q9UNH7 406 aa11.17□□□□□ -0.62
TRIM27-207ENST00000498117 C19orf53Q9UNZ5 99 aaPredicted RBP11.17□□□□□ -0.62
TRIM27-207ENST00000498117 GJE1A6NN92 205 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 ALG1L2C9J202 215 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 KCNH1O95259 989 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 PGM3O95394 542 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 C2P06681 752 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 GSTA2P09210 222 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 SFTPDP35247 375 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 OR3A2P47893 321 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 MANFP55145 182 aaKnown RBP11.16□□□□□ -0.62
TRIM27-207ENST00000498117 GRAMD1BQ3KR37 738 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 IQCCQ4KMZ1 466 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 ARL13AQ5H913 290 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-207ENST00000498117 KLHL7Q8IXQ5 586 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 PTGR2Q8N8N7 351 aaPredicted RBP11.16□□□□□ -0.62
TRIM27-207ENST00000498117 OR4F6Q8NGB9 312 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 FAM110BQ8TC76 370 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 PHF21BQ96EK2 531 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 INPP5KQ9BT40 448 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 SRXN1Q9BYN0 137 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 PPP2R2CQ9Y2T4 447 aa11.16□□□□□ -0.62
TRIM27-207ENST00000498117 A0A0A6YYJ9 748 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 GNG14A0A1W2PPG7 69 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 OR5H1A6NKK0 313 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 SLCO1B7G3V0H7 640 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 STX16-NPEPL1H3BU86 382 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 STX16O14662 325 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 EIF3HO15372 352 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 LY6HO94772 140 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 KLHL2O95198 593 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 CD40P25942 277 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 GABRA3P34903 492 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 EIF1P41567 113 aaKnown RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 SLC18A2Q05940 514 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 ZNF540Q8NDQ6 660 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 POC1BQ8TC44 478 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 NSUN5Q96P11 429 aaKnown RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 LMF2Q9BU23 707 aaKnown RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 BCO1Q9HAY6 547 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 DDX18Q9NVP1 670 aaKnown RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 KLHL9Q9P2J3 617 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 DMGDHQ9UI17 866 aaKnown RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 TMEFF2Q9UIK5 374 aaPredicted RBP11.15□□□□□ -0.62
TRIM27-207ENST00000498117 PCTPQ9UKL6 214 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 TMCO1Q9UM00 188 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 SNX12Q9UMY4 172 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 FKBP7Q9Y680 259 aa11.15□□□□□ -0.62
TRIM27-207ENST00000498117 TGP01266 2768 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 IGHV4-61A0A0C4DH41 118 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 LOC390937A0A1W2PQ73 354 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 UPK1AO00322 258 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 RGS14O43566 566 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 PCDH7O60245 1069 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 OTCP00480 354 aa11.14□□□□□ -0.63
TRIM27-207ENST00000498117 HSD3B1P14060 373 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms