RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SDHAF3Q9NRP4 125 aa16.65■□□□□ 0.26
PRKCB-209ENST00000498058 DNHD1Q96M86 4753 aa16.65■□□□□ 0.26
PRKCB-209ENST00000498058 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 TRPC5OSA6NMA1 111 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 NPIPB8E9PQR5 432 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 EDF1O60869 148 aaKnown RBP16.64■□□□□ 0.25
PRKCB-209ENST00000498058 CD8BP10966 210 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 GYS2P54840 703 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 GNGT1P63211 74 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 PRR5P85299 388 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 HSPB3Q12988 150 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 Q5PR19 223 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 SHEQ5VZ18 495 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 ANKRD34AQ69YU3 496 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 Q6ZSR9 355 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 DDIASQ8IXT1 998 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 OR2T11Q8NH01 316 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 OR4C3Q8NH37 302 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 TWIST2Q8WVJ9 160 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 GIMAP5Q96F15 307 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 CHMP6Q96FZ7 201 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 ZC3HAV1LQ96H79 300 aaKnown RBP16.64■□□□□ 0.25
PRKCB-209ENST00000498058 SIKE1Q9BRV8 207 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 MED18Q9BUE0 208 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 NSRP1Q9H0G5 558 aaKnown RBP16.64■□□□□ 0.25
PRKCB-209ENST00000498058 PTGES2Q9H7Z7 377 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 SLCO1B3Q9NPD5 702 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 EQTNQ9NQ60 294 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 FBXO34Q9NWN3 711 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 ZNF175Q9Y473 711 aa16.64■□□□□ 0.25
PRKCB-209ENST00000498058 SLC28A1O00337 649 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 HDAC3O15379 428 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 RGS14O43566 566 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 NKX2-2O95096 273 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 OPN1LWP04000 364 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 THBDP07204 575 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 TROVE2P10155 538 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRKCB-209ENST00000498058 ACP2P11117 423 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 PRPH2P23942 346 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 LSP1P33241 339 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 EEFSECP57772 596 aaKnown RBP16.63■□□□□ 0.25
PRKCB-209ENST00000498058 GLYR1Q49A26 553 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-209ENST00000498058 IKBIPQ70UQ0 350 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 FBXO30Q8TB52 745 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 ARSGQ96EG1 525 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 ADGRG7Q96K78 797 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 FCRL1Q96LA6 429 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 TUBB1Q9H4B7 451 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 UBTD1Q9HAC8 227 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 PNPOQ9NVS9 261 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 ELOVL5Q9NYP7 299 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 CLEC4AQ9UMR7 237 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 VDAC3Q9Y277 283 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 WBP11Q9Y2W2 641 aaKnown RBP16.63■□□□□ 0.25
PRKCB-209ENST00000498058 DNAJC15Q9Y5T4 150 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 AP4B1Q9Y6B7 739 aa16.63■□□□□ 0.25
PRKCB-209ENST00000498058 TMEM233B4DJY2 109 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 C16orf97H3BN30 126 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 LINC01387J3KSC0 135 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 SEC22BO75396 215 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 TGDSO95455 350 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 KITP10721 976 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 ADSLP30566 484 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 C17orf67Q0P5P2 114 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 ZNHIT3Q15649 155 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 ACKR1Q16570 336 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 CTU2Q2VPK5 515 aaKnown RBP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 CLEC9AQ6UXN8 241 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 FAM214BQ7L5A3 538 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 FAM110BQ8TC76 370 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 SLC9A6Q92581 669 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 PIP5K1AQ99755 562 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 TBL1XR1Q9BZK7 514 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 ZNF226Q9NYT6 803 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 MARCOQ9UEW3 520 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-209ENST00000498058 PROCRQ9UNN8 238 aa16.62■□□□□ 0.25
PRKCB-209ENST00000498058 PDPK1O15530 556 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 AKAP10O43572 662 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 SMPD2O60906 423 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 SKAP2O75563 359 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 OXSR1O95747 527 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 LY6G6DO95868 133 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 IFI6P09912 130 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 PRPS2P11908 318 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 SDC1P18827 310 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 EFNA1P20827 205 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 FRKP42685 505 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 KCNJ5P48544 419 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 PRKAG1P54619 331 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 PDCD2Q16342 344 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-209ENST00000498058 UGT3A2Q3SY77 523 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 FIGNL1Q6PIW4 674 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 LRRC75A-AS1Q8N1F1 130 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 SLC16A11Q8NCK7 471 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 CLHC1Q8NHS4 586 aa16.61■□□□□ 0.25
PRKCB-209ENST00000498058 POC1BQ8TC44 478 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms