RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TTC28Q96AY4 2481 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 NCKAP5O14513 1909 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 C2orf92A0A1B0GVN3 265 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCDC160A6NGH7 325 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 TRIM64A6NGJ6 449 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 TRIM64CA6NLI5 447 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 OR6C76A6NM76 312 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ZAR1LA6NP61 321 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 C9J4A7 227 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 E9PQ18 207 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 NPIPB9F8W1W9 429 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 M0R129 80 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ALOX12BO75342 701 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 BCAS1O75363 584 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 GASTP01350 101 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CYC1P08574 325 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 LINGO3P0C6S8 592 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCDC159P0C7I6 412 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PRG2P13727 222 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PTNP21246 168 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 MMP11P24347 488 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CHMP24386 653 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CRHBPP24387 322 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 POU1F1P28069 291 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCKBRP32239 447 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PPICP45877 212 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 GPR4P46093 362 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 MMP16P51512 607 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CRISP1P54107 249 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ATP12AP54707 1039 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 FOXL2P58012 376 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 DCAF7P61962 342 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PLCXD2Q0VAA5 305 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 IL11RAQ14626 422 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 SF3A2Q15428 464 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF141Q15928 474 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ZSWIM7Q19AV6 140 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCDC157Q569K6 752 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 FOXB2Q5VYV0 432 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 RRM2BQ7LG56 351 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ZNF550Q7Z398 422 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ANKRD37Q7Z713 158 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 GRAMD2AQ8IUY3 354 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCDC71Q8IV32 467 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 P3H2Q8IVL5 708 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CMIPQ8IY22 773 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PRR22Q8IZ63 422 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 NLGN4XQ8N0W4 816 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC34A3Q8N130 599 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC38A9Q8NBW4 561 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PLPP5Q8NEB5 264 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 BPIFB6Q8NFQ5 453 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 TOR1AIP2Q8NFQ8 470 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 OR1N1Q8NGS0 311 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 FANK1Q8TC84 345 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 GNPDA2Q8TDQ7 276 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 GRHL3Q8TE85 626 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 TMEM255BQ8WV15 326 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 OIT3Q8WWZ8 545 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CNOT9Q92600 299 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 ATOH1Q92858 354 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 FAM46AQ96IP4 442 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 WWTR1Q9GZV5 400 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 POLR1BQ9H9Y6 1135 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 CCNB1IP1Q9NPC3 277 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 RASSF1Q9NS23 344 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 TBC1D23Q9NUY8 699 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 SCN3BQ9NY72 215 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 PLA2G2EQ9NZK7 142 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 C19orf25Q9UFG5 118 aaPredicted RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 NXT1Q9UKK6 140 aaKnown RBP7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 RNF6Q9Y252 685 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC35A3Q9Y2D2 325 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 VCANP13611 3396 aa7.45□□□□□ -1.22
PDZRN3-212ENST00000498048 A0A087WUU8 490 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 IGHV3-20A0A0C4DH32 117 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 SERINC4A6NH21 518 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 SCDO00767 359 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 CHP2O43745 196 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 XPNPEP2O43895 674 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 RFPL3O75679 317 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 UTS2O95399 124 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 NTN1O95631 604 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 IL33O95760 270 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 CSTAP01040 98 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 TFAP2AP05549 437 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 UBL4AP11441 157 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 HPGDP15428 266 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 SLC5A2P31639 672 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 ALDH3B2P48448 385 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 CCR4P51679 360 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 NR0B1P51843 470 aaKnown RBP7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 EMP2P54851 167 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 PSPHP78330 225 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 MC2RQ01718 297 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 TEKQ02763 1124 aa7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 ZFP36L1Q07352 338 aaKnown RBP7.44□□□□□ -1.22
PDZRN3-212ENST00000498048 TSPAN31Q12999 210 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms