RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 C19orf24Q9BVV8 132 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 HSD3B7Q9H2F3 369 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 EHD1Q9H4M9 534 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 DHX33Q9H6R0 707 aaKnown RBP2.36□□□□□ -2.03
PSPC1-205ENST00000497722 MRPL39Q9NYK5 338 aaKnown RBP2.36□□□□□ -2.03
PSPC1-205ENST00000497722 ACTR3BQ9P1U1 418 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 ANKMY1Q9P2S6 941 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 ATXN10Q9UBB4 475 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 L3MBTL1Q9Y468 752 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 MAB21L2Q9Y586 359 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 KIF25-AS1Q9Y6Z4 181 aa2.36□□□□□ -2.03
PSPC1-205ENST00000497722 DUX1O43812 170 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 HSPB1P04792 205 aaKnown RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 ZP3P21754 424 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 HOXD10P28358 340 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 RPL8P62917 257 aaKnown RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 OC90Q02509 493 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 SCGB2A2Q13296 93 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 CHI3L2Q15782 390 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 SBK1Q52WX2 424 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 UFSP1Q6NVU6 142 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 PLBD1Q6P4A8 553 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 BLOC1S2Q6QNY1 142 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 CATSPER4Q7RTX7 472 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 TMEM17Q86X19 198 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 CBWD2Q8IUF1 395 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 NRMQ8IXM6 262 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 GCNT2Q8N0V5 402 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 ALLCQ8N6M5 410 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 LINC01006Q8NI28 216 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 SMIM14Q96QK8 99 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 CAB39LQ9H9S4 337 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 GPN2Q9H9Y4 310 aaPredicted RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 FANCFQ9NPI8 374 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 ABCB10Q9NRK6 738 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 CD274Q9NZQ7 290 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 OR1A1Q9P1Q5 309 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 XPO7Q9UIA9 1087 aaKnown RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 SAMD4AQ9UPU9 718 aaKnown RBP2.35□□□□□ -2.03
PSPC1-205ENST00000497722 AURKCQ9UQB9 309 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 RNF6Q9Y252 685 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 PLLPQ9Y342 182 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 SPACA6W5XKT8 324 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 ATP8B3O60423 1300 aa2.35□□□□□ -2.03
PSPC1-205ENST00000497722 RNF222A6NCQ9 220 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 TRIM49D1C9J1S8 452 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 STX7O15400 261 aaKnown RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 SCRG1O75711 98 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 GPX5O75715 221 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 B3GALNT1O75752 331 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CABYRO75952 493 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 OR4F21O95013 312 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 STSP08842 583 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CLUP10909 449 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 FUT1P19526 365 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ANXA13P27216 316 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 RBMXP38159 391 aaKnown RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ZNF45Q02386 682 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 FUT7Q11130 342 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CDKN3Q16667 212 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ZNF544Q6NX49 715 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 NIPAL3Q6P499 406 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 AFTPHQ6ULP2 937 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 TMEM184AQ6ZMB5 413 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 SCARA5Q6ZMJ2 495 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CYS1Q717R9 158 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ARCQ7LC44 396 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 DPY19L4Q7Z388 723 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ZNF589Q86UQ0 364 aaPredicted RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CENPLQ8N0S6 344 aaPredicted RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 MYLPFQ96A32 169 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 NOL4LQ96MY1 436 aaPredicted RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 SLC30A2Q9BRI3 323 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 TMEM121Q9BTD3 319 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 ZNF416Q9BWM5 594 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 NARFLQ9H6Q4 476 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 WDR76Q9H967 626 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 PLSCR3Q9NRY6 295 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 PAK1IP1Q9NWT1 392 aaPredicted RBP2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CYTH4Q9UIA0 394 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 IFT52Q9Y366 437 aa2.34□□□□□ -2.03
PSPC1-205ENST00000497722 CARMIL1Q5VZK9 1371 aa2.34□□□□□ -2.04
PSPC1-205ENST00000497722 NCAPD2Q15021 1401 aa2.34□□□□□ -2.04
PSPC1-205ENST00000497722 A0A087WZY1 265 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 A0A0U1RQV5 110 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 GSAPA4D1B5 854 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 B4DXG7 233 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ABCD4O14678 606 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 MAPK13O15264 365 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 CLDN3O15551 220 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 EMC8O43402 210 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 LYPLA1O75608 230 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 TRIM16O95361 564 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 MBD3O95983 291 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 CPN1P15169 458 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 HPDP32754 393 aaPredicted RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 EFNA3P52797 238 aa2.33□□□□□ -2.04
PSPC1-205ENST00000497722 MRPS11P82912 194 aaKnown RBP2.33□□□□□ -2.04
PSPC1-205ENST00000497722 ST3GAL3Q11203 375 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms