RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SPP1P10451 314 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 THBS2P35442 1172 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CLDN12P56749 244 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PITPNAQ00169 270 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SYTL3Q4VX76 610 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 IKBIPQ70UQ0 350 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM99Q8N816 258 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF354BQ96LW1 612 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF607Q96SK3 696 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC19A3Q9BZV2 496 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 HRASLSQ9HDD0 168 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC13A4Q9UKG4 626 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CBLCQ9ULV8 474 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 A4GNTQ9UNA3 340 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 ARID1AO14497 2285 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SMAD6O43541 496 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PRAMEF2O60811 474 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC16A8O95907 504 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SYN1P17600 705 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CCR9P51686 369 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PRMT2P55345 433 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 RAP2BP61225 183 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 S100A12P80511 92 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 POM121L1PQ3SYA9 428 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PRAMEF13Q5VWM6 474 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SPRYD7Q5W111 196 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 PRICKLE2Q7Z3G6 844 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 OR52I2Q8NH67 350 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 OR5W2Q8NH69 310 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 UBL7Q96S82 380 aaPredicted RBP12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 BCL2L14Q9BZR8 327 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 TRPV2Q9Y5S1 764 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 A0A0G2JN53 185 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 A0A1B0GW55 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L2P0CJ85 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L3P0CJ86 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L4P0CJ87 422 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L5P0CJ88 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L6P0CJ89 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4L7P0CJ90 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 ATF1P18846 271 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CORO1AP31146 461 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CDK5Q00535 292 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 B4GALNT1Q00973 533 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 HES5Q5TA89 166 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 MED27Q6P2C8 311 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 CDH26Q8IXH8 852 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 SLC25A28Q96A46 364 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 C11orf49Q9H6J7 331 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 C14orf105Q9NVL8 296 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 DUX4Q9UBX2 424 aa12.22□□□□□ -0.45
GAPVD1-220ENST00000497580 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 UBE2QL1A1L167 161 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 CLDN11O75508 207 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 UGT2B7P16662 529 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 GUCA2BQ16661 112 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 LINC00303Q3SY05 128 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 LGALS14Q8TCE9 139 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 GNPDA2Q8TDQ7 276 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 FBXO17Q96EF6 278 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 GPN1Q9HCN4 374 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 ASB6Q9NWX5 421 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 ZDHHC3Q9NYG2 299 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 CA5BQ9Y2D0 317 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 KLF2Q9Y5W3 355 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 CDH23Q9H251 3354 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 MBLAC1A4D2B0 266 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM202A6NGA9 273 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 NPIPB15A6NHN6 443 aaPredicted RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 ABCD4O14678 606 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 EIF3GO75821 320 aaKnown RBP eCLIP12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 CXCL14O95715 111 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 PYCR1P32322 319 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 GATMP50440 423 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 C9orf131Q5VYM1 1079 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 C6orf120Q7Z4R8 191 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 C17orf47Q8NEP4 570 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 LRIG1Q96JA1 1093 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 MNTQ99583 582 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 TEX12Q9BXU0 123 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 TMEM185BQ9H7F4 350 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 ISYNA1Q9NPH2 558 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 LHX3Q9UBR4 397 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 DPP7Q9UHL4 492 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 RNF215Q9Y6U7 377 aa12.21□□□□□ -0.45
GAPVD1-220ENST00000497580 HYAL3O43820 417 aaPredicted RBP12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 GIPP09681 153 aaPredicted RBP12.21□□□□□ -0.46
GAPVD1-220ENST00000497580 UBE2IP63279 158 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms