RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CLUP10909 449 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 PSMA2P25787 234 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 BDKRB1P46663 353 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 DHPSP49366 369 aaPredicted RBP3.46□□□□□ -1.86
VPS36-206ENST00000497149 P2RY4P51582 365 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 KRTAP10-3P60369 221 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 MRPS11P82912 194 aaKnown RBP3.46□□□□□ -1.86
VPS36-206ENST00000497149 ST3GAL3Q11203 375 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 MAPK6Q16659 721 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 ISXQ2M1V0 245 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 SULT1C3Q6IMI6 304 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 GRAMD2AQ8IUY3 354 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 TRUB1Q8WWH5 349 aaKnown RBP3.46□□□□□ -1.86
VPS36-206ENST00000497149 SLC25A38Q96DW6 304 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 SLC35D1Q9NTN3 355 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 PDE10AQ9Y233 779 aa3.46□□□□□ -1.86
VPS36-206ENST00000497149 ZNF646O15015 1829 aaPredicted RBP3.45□□□□□ -1.86
VPS36-206ENST00000497149 PPIAL4CA0A0B4J2A2 164 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 A0A1B0GWJ7 208 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 OR7A17O14581 309 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 HAT1O14929 419 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 MAPK13O15264 365 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 CTAGE5O15320 804 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 ZNF254O75437 659 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 SERF1AO75920 110 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 MFN2O95140 757 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 HEXBP07686 556 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 PPIAL4GP0DN37 164 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 ADORA2BP29275 332 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 UGT1A3P35503 534 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 STARP49675 285 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 ACADVLP49748 655 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 OVGP1Q12889 678 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 C9orf129Q5T035 196 aaKnown RBP3.45□□□□□ -1.86
VPS36-206ENST00000497149 RIPPLY2Q5TAB7 128 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 METTL11BQ5VVY1 283 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 OR10T2Q8NGX3 314 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 PSMG2Q969U7 264 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 C4orf36Q96KX1 117 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 MAPKAP1Q9BPZ7 522 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 YTHDF1Q9BYJ9 559 aaKnown RBP3.45□□□□□ -1.86
VPS36-206ENST00000497149 CAB39LQ9H9S4 337 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 SPRR3Q9UBC9 169 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 PPIAL4AQ9Y536 164 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 USP16Q9Y5T5 823 aa3.45□□□□□ -1.86
VPS36-206ENST00000497149 EPOPA6NHQ4 379 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 DHRS7CA6NNS2 312 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 KLLNB2CW77 178 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 WWP2O00308 870 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 GPX5O75715 221 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 ASNSP08243 561 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 CCDC166P0CW27 439 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 DESP17661 470 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 ZBTB25P24278 435 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 RPL29P47914 159 aaKnown RBP3.44□□□□□ -1.86
VPS36-206ENST00000497149 NDPQ00604 133 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 OR2B11Q5JQS5 317 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 NCR3LG1Q68D85 454 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 OR5M10Q6IEU7 315 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 GET4Q7L5D6 327 aaPredicted RBP3.44□□□□□ -1.86
VPS36-206ENST00000497149 MOB1BQ7L9L4 216 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 DPY19L4Q7Z388 723 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 TMEM17Q86X19 198 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 MYLPFQ96A32 169 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 FAM122AQ96E09 287 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 CITED1Q99966 193 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 PPDPFQ9H3Y8 114 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 LAMP5Q9UJQ1 280 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 GSTK1Q9Y2Q3 226 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 ATP10DQ9P241 1426 aa3.44□□□□□ -1.86
VPS36-206ENST00000497149 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS36-206ENST00000497149 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 LYPD3O95274 346 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 STSP08842 583 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 KRT13P13646 458 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 ACAA2P42765 397 aaKnown RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 RGRP47804 291 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 RIPPLY3P57055 190 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 RIPPLY1Q0D2K3 151 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 NDUFA9Q16795 377 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 CXCL17Q6UXB2 119 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 APTXQ7Z2E3 356 aaKnown RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 TRPM8Q7Z2W7 1104 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 OR2A12Q8NGT7 310 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 AENQ8WTP8 325 aaKnown RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 HAVCR1Q96D42 359 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 NOL4LQ96MY1 436 aaPredicted RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 TPPP3Q9BW30 176 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 Q9H3A6 140 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 PAK1IP1Q9NWT1 392 aaPredicted RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 TMEM9Q9P0T7 183 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 WRAP73Q9P2S5 460 aaPredicted RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 XPO7Q9UIA9 1087 aaKnown RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 RIMS3Q9UJD0 308 aa3.43□□□□□ -1.86
VPS36-206ENST00000497149 ISY1Q9ULR0 285 aaKnown RBP3.43□□□□□ -1.86
VPS36-206ENST00000497149 TNRQ92752 1358 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms