RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AK1P00568 194 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 SOAT1P35610 550 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 PCYT1AP49585 367 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 AGFG1P52594 562 aaKnown RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 CLNS1AP54105 237 aaKnown RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 SUMO3P55854 103 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 RPS3AP61247 264 aaKnown RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 STX3Q13277 289 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 MPP2Q14168 576 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 PLPPR5Q32ZL2 321 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 DCST2Q5T1A1 773 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 OGFOD2Q6N063 350 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 GGNQ86UU5 652 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 GATSQ8NAP1 163 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 ADAMTS15Q8TE58 950 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 TESCQ96BS2 214 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 PPP1R36Q96LQ0 422 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 RBM24Q9BX46 236 aaKnown RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 PINK1Q9BXM7 581 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 CLEC4MQ9H2X3 399 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 ZNF395Q9H8N7 513 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 RNF122Q9H9V4 155 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 MEAF6Q9HAF1 191 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 MED17Q9NVC6 651 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 PAQR5Q9NXK6 330 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-213ENST00000496347 VDAC3Q9Y277 283 aa14.17□□□□□ -0.14
HDAC4-213ENST00000496347 RNF103-CHMP3A0A140T963 221 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 TMEM120BA0PK00 339 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 FAM221AA4D161 298 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 H3BNH8 94 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 MSTNO14793 375 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 ELK4P28324 431 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 EIF1P41567 113 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 SUCLG1P53597 346 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 SLC18A1P54219 525 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 CLDN15P56746 228 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 CLDN20P56880 219 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 BST1Q10588 318 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 SNTB1Q13884 538 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 DAZAP2Q15038 168 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 CD226Q15762 336 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 PGS1Q32NB8 556 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 HHATQ5VTY9 493 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 PLXDC2Q6UX71 529 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 WDR75Q8IWA0 830 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 OR5M1Q8NGP8 315 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 OR5AK3PQ8NH89 298 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 B4GALNT2Q8NHY0 566 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 SMPDL3BQ92485 455 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 NINJ1Q92982 152 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 POLDIP3Q9BY77 421 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 NUF2Q9BZD4 464 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 DPY30Q9C005 99 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 RASSF1Q9NS23 344 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 FBXO34Q9NWN3 711 aa14.16□□□□□ -0.14
HDAC4-213ENST00000496347 DNAJB12Q9NXW2 375 aaKnown RBP14.16□□□□□ -0.14
HDAC4-213ENST00000496347 DUXAA6NLW8 204 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 GMFGO60234 142 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 EPXP11678 715 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 LBPP18428 481 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 ME2P23368 584 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 CPOXP36551 454 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 PON3Q15166 354 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 TESK1Q15569 626 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 ANXA8L1Q5VT79 327 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 SPNS3Q6ZMD2 512 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 LUZP2Q86TE4 346 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 ANKRD42Q8N9B4 389 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 FNDC9Q8TBE3 224 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 RAB3IL1Q8TBN0 382 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 SH3YL1Q96HL8 342 aaPredicted RBP14.15□□□□□ -0.14
HDAC4-213ENST00000496347 DACH2Q96NX9 599 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 OR7D2Q96RA2 312 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 PAIP2Q9BPZ3 127 aaKnown RBP14.15□□□□□ -0.14
HDAC4-213ENST00000496347 GPATCH1Q9BRR8 931 aaKnown RBP14.15□□□□□ -0.14
HDAC4-213ENST00000496347 NMUR2Q9GZQ4 415 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 HEATR5AQ86XA9 2040 aa14.15□□□□□ -0.14
HDAC4-213ENST00000496347 MED13LQ71F56 2210 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 E9PBE3 544 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 NPIPB9F8W1W9 429 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 H0YC42 278 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 ANKRD28O15084 1053 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 PSMA4P25789 261 aaKnown RBP14.14□□□□□ -0.15
HDAC4-213ENST00000496347 ATP12AP54707 1039 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 TPD52P55327 224 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-213ENST00000496347 RAC1P63000 192 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 ZNF117Q03924 483 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 GUSBP1Q15486 140 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 KLHL26Q53HC5 615 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 OR4F3Q6IEY1 312 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 ESPNLQ6ZVH7 1005 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 CLECL1Q8IZS7 167 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 CNEP1R1Q8N9A8 125 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 CHDHQ8NE62 594 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-213ENST00000496347 VPS37AQ8NEZ2 397 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 OR5D16Q8NGK9 328 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 OR4A15Q8NGL6 344 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 MIPOL1Q8TD10 442 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 NUDT8Q8WV74 236 aa14.14□□□□□ -0.15
HDAC4-213ENST00000496347 OIT3Q8WWZ8 545 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms