RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 KLHL28Q9NXS3 571 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 ETAA1Q9NY74 926 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 VSX1Q9NZR4 365 aaPredicted RBP4.2□□□□□ -1.74
XPA-204ENST00000496104 MTRF1LQ9UGC7 380 aaKnown RBP4.2□□□□□ -1.74
XPA-204ENST00000496104 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 MGAT4BQ9UQ53 548 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 CHMP2BQ9UQN3 213 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 MYRFQ9Y2G1 1151 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 ALG6Q9Y672 507 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 AP4B1Q9Y6B7 739 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 ALPK2Q86TB3 2170 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 HECTD4Q9Y4D8 3996 aa4.2□□□□□ -1.74
XPA-204ENST00000496104 A0A0A6YYC8 382 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 NSG1A0A0A6YYJ2 146 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CDHR4A6H8M9 788 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PINLYPA6NC86 204 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PDZK1P1A8MUH7 402 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 BECN2A8MW95 431 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 NPIPA2E9PIF3 369 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 NPIPA3F8WFD2 350 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 I3L1I5 382 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 J3KR12 359 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 LGALS8O00214 317 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PSMD11O00231 422 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 BTN3A3O00478 584 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CYR61O00622 381 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 FFAR3O14843 346 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SLC16A3O15427 465 aaKnown RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 GPR42O15529 346 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CDC40O60508 579 aaKnown RBP eCLIP4.19□□□□□ -1.74
XPA-204ENST00000496104 SELENOFO60613 162 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 LMX1BO60663 402 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PRAMEF11O60813 436 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ERN1O75460 977 aaKnown RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 CYP7B1O75881 506 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 OR2B3O76000 313 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 OR6A2O95222 327 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 IGHV4-39P01824 125 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TFP02787 698 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 HBQ1P09105 142 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 RPA2P15927 270 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 HOXB9P17482 250 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 POLR2CP19387 275 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 NCF2P19878 526 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 BMP5P22003 454 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ZFP36P26651 326 aaKnown RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 CASP1P29466 404 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 NSG1P42857 185 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 NR2C2P49116 596 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 STARP49675 285 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 HTR6P50406 440 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 HNRNPFP52597 415 aaKnown RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 ZNF136P52737 540 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 STC1P52823 247 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TPM4P67936 248 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 RAD51Q06609 339 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TRAF2Q12933 501 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PDE7AQ13946 482 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ZNF385BQ569K4 471 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TFDP3Q5H9I0 405 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CXorf66Q5JRM2 361 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 BRMS1LQ5PSV4 323 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ACER2Q5QJU3 275 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 LRRC66Q68CR7 880 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 KCTD11Q693B1 232 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 WBP2NLQ6ICG8 309 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SULT1C3Q6IMI6 304 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SLC25A25Q6KCM7 469 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 C8orf74Q6P047 294 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TMEM108Q6UXF1 575 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 DLEU7Q6UYE1 221 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 RANBP10Q6VN20 620 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 B3GLCTQ6Y288 498 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TMEM182Q6ZP80 229 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 REXO1L1PQ8IX06 675 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CCDC65Q8IXS2 484 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PRSS58Q8IYP2 241 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CMTM4Q8IZR5 234 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 FAM9CQ8IZT9 166 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SYCE1Q8N0S2 351 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 METTL27Q8N6F8 245 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 OR52L2PQ8NGH6 319 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 C16orf52Q8NHV5 167 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 HUS1BQ8NHY5 278 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ZFP28Q8NHY6 868 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ACMSDQ8TDX5 336 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 OIT3Q8WWZ8 545 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 ST8SIA2Q92186 375 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 EFHD2Q96C19 240 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 LINGO1Q96FE5 620 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 TRMT61AQ96FX7 289 aaKnown RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 CDKN2AIPNLQ96HQ2 116 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 QRFPRQ96P65 431 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 PANX3Q96QZ0 392 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SMC6Q96SB8 1091 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 CPXM1Q96SM3 734 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SPAG8Q99932 426 aaPredicted RBP4.19□□□□□ -1.74
XPA-204ENST00000496104 ANGPTL4Q9BY76 406 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 NMNAT2Q9BZQ4 307 aa4.19□□□□□ -1.74
XPA-204ENST00000496104 SLC6A15Q9H2J7 730 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms