RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
PTPRF-214ENST00000496043 F8P00451 2351 aa11.47□□□□□ -0.57
PTPRF-214ENST00000496043 H3BNH8 94 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 EIF1AYO14602 144 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ITM2AO43736 263 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 SNUPNO95149 360 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 SERPINE1P05121 402 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 MYZAPP0CAP1 466 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 G6PDP11413 515 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 FCGR2AP12318 317 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CPOXP36551 454 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CD79BP40259 229 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 EIF1AXP47813 144 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CLDN8P56748 225 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ABCE1P61221 599 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 RAC1P63000 192 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 SIRPAP78324 504 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 TP53BP2Q13625 1128 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CHI3L2Q15782 390 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 PGS1Q32NB8 556 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 PDSS1Q5T2R2 415 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 VWA1Q6PCB0 445 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 BHLHB9Q6PI77 547 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 MTERF4Q7Z6M4 381 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 RIMKLAQ8IXN7 391 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 GTPBP8Q8N3Z3 284 aaPredicted RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF610Q8N9Z0 462 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ZNF527Q8NB42 609 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 NUDT8Q8WV74 236 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CDS1Q92903 461 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 SH3YL1Q96HL8 342 aaPredicted RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 DUSP26Q9BV47 211 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 CXorf36Q9H7Y0 433 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 MED17Q9NVC6 651 aa11.46□□□□□ -0.57
PTPRF-214ENST00000496043 NOP53Q9NZM5 478 aaKnown RBP11.46□□□□□ -0.57
PTPRF-214ENST00000496043 ANKRD17O75179 2603 aaKnown RBP11.46□□□□□ -0.58
PTPRF-214ENST00000496043 C7orf72A4D263 438 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 GTPBP1O00178 669 aaKnown RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 TM9SF1O15321 606 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 SYNGR4O95473 234 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 CGAP01215 116 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 RAF1P04049 648 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 HRGP04196 525 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 CD8BP10966 210 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 CD99P14209 185 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ME2P23368 584 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 EIF1P41567 113 aaKnown RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 KCNJ5P48544 419 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ATP12AP54707 1039 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 RIPPLY3P57055 190 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 C21orf58P58505 322 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF844Q08AG5 666 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 KEAP1Q14145 624 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 KLHL26Q53HC5 615 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 GTF2IRD2BQ6EKJ0 949 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PPP4R4Q6NUP7 873 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 GTF2IRD2Q86UP8 949 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 GGNQ86UU5 652 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PHOSPHO1Q8TCT1 267 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 SFXN5Q8TD22 340 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 MBD6Q96DN6 1003 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PKNOX2Q96KN3 472 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 WFIKKN1Q96NZ8 548 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 OPN3Q9H1Y3 402 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 CENPHQ9H3R5 247 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF395Q9H8N7 513 aaPredicted RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PLEKHF2Q9H8W4 249 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 NEUROD4Q9HD90 331 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 KCNK9Q9NPC2 374 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PLSCR4Q9NRQ2 329 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 GPATCH2Q9NW75 528 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ASIC5Q9NY37 505 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF226Q9NYT6 803 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 MCTS1Q9ULC4 181 aaKnown RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PCDHGB4Q9UN71 923 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 PROCRQ9UNN8 238 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 RAP2CQ9Y3L5 183 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 KCNE3Q9Y6H6 103 aa11.45□□□□□ -0.58
PTPRF-214ENST00000496043 TEP1Q99973 2627 aaKnown RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 ANKHD1Q8IWZ3 2542 aaKnown RBP11.45□□□□□ -0.58
PTPRF-214ENST00000496043 MED12LQ86YW9 2145 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 PCNX3Q9H6A9 2034 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 DUXAA6NLW8 204 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 C16orf97H3BN30 126 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 ADAMDEC1O15204 470 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 ZNF500O60304 480 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-214ENST00000496043 AQP8O94778 261 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 PLGP00747 810 aaPredicted RBP11.44□□□□□ -0.58
PTPRF-214ENST00000496043 OPN1LWP04000 364 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 TUBBP07437 444 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 POU2F1P14859 743 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 MATN1P21941 496 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 PSMA4P25789 261 aaKnown RBP11.44□□□□□ -0.58
PTPRF-214ENST00000496043 SLC1A6P48664 564 aa11.44□□□□□ -0.58
PTPRF-214ENST00000496043 RPL14P50914 215 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms