RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 NFKBIDQ8NI38 313 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 NSL1Q96IY1 281 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 SPATA5L1Q9BVQ7 753 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 TRIM8Q9BZR9 551 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 DEFB127Q9H1M4 99 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 TSPAN10Q9H1Z9 355 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 UBQLN3Q9H347 655 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 DSN1Q9H410 356 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ARMC7Q9H6L4 198 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 LDAHQ9H6V9 325 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 RUBCNLQ9H714 662 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ACKR4Q9NPB9 350 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 DKKL1Q9UK85 242 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 IFT52Q9Y366 437 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 FAM47E-STBD1D6RA91 191 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF264O43296 627 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 HCRTR2O43614 444 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CDC40O60508 579 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 EIF4E2O60573 245 aaKnown RBP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 HCN1O60741 890 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 PDE9AO76083 593 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 PGM3O95394 542 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CSTAP01040 98 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 HPNP05981 417 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 UBL4AP11441 157 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 PLA2G2AP14555 144 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 ETS2P15036 469 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CALB2P22676 271 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 SRD5A2P31213 254 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CPA2P48052 419 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 TDGF1P3P51864 188 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 DSCR4P56555 118 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 PSME3P61289 254 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 RBPJQ06330 500 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 FGFBP1Q14512 234 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 MAPK11Q15759 364 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CD226Q15762 336 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 ADRM1Q16186 407 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 LIN52Q52LA3 116 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 CMPK2Q5EBM0 449 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 INTS11Q5TA45 600 aaKnown RBP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 GFRALQ6UXV0 394 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 C10orf111Q8N326 155 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 FADS6Q8N9I5 356 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 GALNT11Q8NCW6 608 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 ST6GALNAC3Q8NDV1 305 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 OR2M3Q8NG83 312 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 OR52P1PQ8NH57 321 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 B4GALNT2Q8NHY0 566 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 WDR60Q8WVS4 1066 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 MIB2Q96AX9 1013 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 REXO5Q96IC2 774 aaKnown RBP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF607Q96SK3 696 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 RTN4RQ9BZR6 473 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 EXO5Q9H790 373 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 MED11Q9P086 117 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 KCNE5Q9UJ90 142 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 MRPS18CQ9Y3D5 142 aaKnown RBP15.58■□□□□ 0.08
HDAC6-235ENST00000495515 DSPPQ9NZW4 1301 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 BOD1L1Q8NFC6 3051 aa15.58■□□□□ 0.08
HDAC6-235ENST00000495515 EXPH5Q8NEV8 1989 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 ADAM10O14672 748 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SERPINB7O75635 380 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 CBX6O95503 412 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 THBS1P07996 1170 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 RPS4Y1P22090 263 aaKnown RBP15.57■□□□□ 0.08
HDAC6-235ENST00000495515 DPP4P27487 766 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SLC7A2P52569 658 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SUMO3P55854 103 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-235ENST00000495515 KCNJ10P78508 379 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 MAPK14Q16539 360 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 VMACQ2NL98 169 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 RPS26P11Q5JNZ5 115 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-235ENST00000495515 ARHGAP11AQ6P4F7 1023 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 C16orf89Q6UX73 402 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 CALHM3Q86XJ0 350 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 PTOV1Q86YD1 416 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SLC15A3Q8IY34 581 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 TOR1AIP2Q8NFQ8 470 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 OR14L1PQ8NHC6 308 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 ZG16BQ96DA0 208 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SH3YL1Q96HL8 342 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-235ENST00000495515 QRSL1Q9H0R6 528 aaKnown RBP15.57■□□□□ 0.08
HDAC6-235ENST00000495515 SPAG4Q9NPE6 437 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 FBXL2Q9UKC9 423 aa15.57■□□□□ 0.08
HDAC6-235ENST00000495515 GCN1Q92616 2671 aaKnown RBP15.56■□□□□ 0.08
HDAC6-235ENST00000495515 A0A087WZY1 265 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 TRGV5A0A0B4J1U4 118 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 PRORSD1PA6NEY8 169 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 FAM220BPB1ANY3 271 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 SUSD5O60279 629 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 DNAJA2O60884 412 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 IGHG3P01860 377 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 NID1P14543 1247 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 PCGF2P35227 344 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 P2RX1P51575 399 aa15.56■□□□□ 0.08
HDAC6-235ENST00000495515 ZNF41P51814 821 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-235ENST00000495515 C8orf82Q6P1X6 216 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-235ENST00000495515 PATL1Q86TB9 770 aaKnown RBP15.56■□□□□ 0.08
HDAC6-235ENST00000495515 ZZZ3Q8IYH5 903 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms