RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KIF1AQ12756 1690 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 CAMTA1Q9Y6Y1 1673 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 FRG2CA6NGY1 282 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 FAM74A7A6NL05 159 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 A8MX80 341 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 SDHDO14521 159 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 NDUFA7O95182 113 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 AK1P00568 194 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 CCND2P30279 289 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 PTGER3P43115 390 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 RPL34P49207 117 aaKnown RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 C1QTNF8P60827 252 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 HTD2P86397 168 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 IL9RQ01113 521 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 PLOD1Q02809 727 aaPredicted RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 PUDPQ08623 228 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 USH1GQ495M9 461 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 LEG1Q6P5S2 330 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 LHFPL4Q7Z7J7 247 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 SERINC5Q86VE9 423 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 ERICH1Q86X53 443 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 KLHL30-AS1Q8NEE0 82 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 FNDC8Q8TC99 324 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 C9orf85Q96MD7 179 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 TBC1D10AQ9BXI6 508 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 GSDMCQ9BYG8 508 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 COQ10BQ9H8M1 238 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 GPN2Q9H9Y4 310 aaPredicted RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 RBM28Q9NW13 759 aaKnown RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 HPF1Q9NWY4 346 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 IMPAD1Q9NX62 359 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 DUSP12Q9UNI6 340 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 EXOSC1Q9Y3B2 195 aaKnown RBP3.37□□□□□ -1.87
SMC4-224ENST00000494612 NEXMIFQ5QGS0 1516 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 KIF1BO60333 1816 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 NUP155O75694 1391 aa3.37□□□□□ -1.87
SMC4-224ENST00000494612 DISP2A7MBM2 1401 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 GON4LQ3T8J9 2241 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 ABCA3Q99758 1704 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 TRBV7-9A0A0J9YWB2 115 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 A0A1W2PQ72 361 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 LRRC30A6NM36 301 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 F8WDY8 70 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 K7EPI3 171 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 CHADO15335 359 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 BCL2L11O43521 198 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 OR4F21O95013 312 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 SLC2A10O95528 541 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 ADRA1AP35348 466 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 MAGEA5P43359 124 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 OR1D4P47884 311 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 NOVA1P51513 510 aaKnown RBP3.36□□□□□ -1.87
SMC4-224ENST00000494612 GPC3P51654 580 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 PEX6Q13608 980 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 Q1RN00 199 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 DNAJC21Q5F1R6 531 aaKnown RBP3.36□□□□□ -1.87
SMC4-224ENST00000494612 ZNF57Q68EA5 555 aaPredicted RBP3.36□□□□□ -1.87
SMC4-224ENST00000494612 SULT1C3Q6IMI6 304 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 VITQ6UXI7 678 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 GCNT7Q6ZNI0 430 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 CATSPER4Q7RTX7 472 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 VPS36Q86VN1 386 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 GCNT2Q8N0V5 402 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 ZBTB44Q8NCP5 570 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 STKLD1Q8NE28 680 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 CNIH3Q8TBE1 160 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 UPRTQ96BW1 309 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 C16orf45Q96MC5 204 aaPredicted RBP3.36□□□□□ -1.87
SMC4-224ENST00000494612 TBCDQ9BTW9 1192 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 TM2D1Q9BX74 207 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 HCAR1Q9BXC0 346 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 NFKBIZQ9BYH8 718 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 RHOJQ9H4E5 214 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 ECT2Q9H8V3 914 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 PALMDQ9NP74 551 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 MIEF1Q9NQG6 463 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 ELOVL2Q9NXB9 296 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 CHMP2BQ9UQN3 213 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 CLTCL1P53675 1640 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 NUP188Q5SRE5 1749 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 NRAPQ86VF7 1730 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 NAIPQ13075 1403 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 TNS3Q68CZ2 1445 aa3.36□□□□□ -1.87
SMC4-224ENST00000494612 A0A087WZY1 265 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 FBLL1A6NHQ2 334 aaKnown RBP3.35□□□□□ -1.87
SMC4-224ENST00000494612 ZSCAN5BA6NJL1 495 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 GPAA1O43292 621 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 TSC22D2O75157 780 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 GJB5O95377 273 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 JCHAINP01591 159 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ANXA3P12429 323 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 UQCRBP14927 111 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 FNTAP49354 379 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 ERVPABLB-1P60509 514 aa3.35□□□□□ -1.87
SMC4-224ENST00000494612 OSTNP61366 133 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms