RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 LMF2Q9BU23 707 aaKnown RBP18.02■□□□□ 0.48
COL27A1-207ENST00000494090 MEN1O00255 615 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 PLATP00750 562 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 GABRB3P28472 473 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 CDK3Q00526 305 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 HMGN2P05204 90 aaKnown RBP18.02■□□□□ 0.48
COL27A1-207ENST00000494090 TIMP2P16035 220 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 UQCRC1P31930 480 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 NKX2-5P52952 324 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-207ENST00000494090 TBCEQ15813 527 aaPredicted RBP18.02■□□□□ 0.48
COL27A1-207ENST00000494090 AWAT2Q6E213 333 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 ANKRD54Q6NXT1 300 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 ELMOD2Q8IZ81 293 aa18.02■□□□□ 0.48
COL27A1-207ENST00000494090 IGHEP01854 428 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 DESI1Q6ICB0 168 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 ARL5BQ96KC2 179 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 TREX2Q9BQ50 279 aaPredicted RBP18.02■□□□□ 0.47
COL27A1-207ENST00000494090 LHX3Q9UBR4 397 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 CPNE6O95741 557 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 CHMP24386 653 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 PRKXP51817 358 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 HES5Q5TA89 166 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 ACOT4Q8N9L9 421 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 ADAMTS16Q8TE57 1224 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 ASB12Q8WXK4 309 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 SORBS1Q9BX66 1292 aaKnown RBP18.02■□□□□ 0.47
COL27A1-207ENST00000494090 SLC6A14Q9UN76 642 aa18.02■□□□□ 0.47
COL27A1-207ENST00000494090 RGS6P49758 472 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 PPA1Q15181 289 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 GGTA1PQ4G0N0 100 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SPRED1Q7Z699 444 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 MFSD6LQ8IWD5 586 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 DEDD2Q8WXF8 326 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 CSNK1G3Q9Y6M4 447 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 ALPLP05186 524 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 APLNRP35414 380 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 PRLHRP49683 370 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 CTSCP53634 463 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 MRPS21P82921 87 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SF3A2Q15428 464 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 PXKQ7Z7A4 578 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 BOLLQ8N9W6 283 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 OR5D16Q8NGK9 328 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 GCDHQ92947 438 aaPredicted RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 CAPNS1P04632 268 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 LPLP06858 475 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 ARSAP15289 507 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 AKR1C2P52895 323 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 PTPRRQ15256 657 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 C6orf132Q5T0Z8 1188 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 DUS1LQ6P1R4 473 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF417Q8TAU3 575 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 RBM24Q9BX46 236 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SAP130Q9H0E3 1048 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SLA2Q9H6Q3 261 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 CER1O95813 267 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SELPLGQ14242 412 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 MRPL43Q8N983 215 aaKnown RBP18.01■□□□□ 0.47
COL27A1-207ENST00000494090 MAP3K3Q99759 626 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 SLAMF8Q9P0V8 285 aa18.01■□□□□ 0.47
COL27A1-207ENST00000494090 A0A0G2JMP0 313 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 NAP1L6A6NFF2 107 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 C1orf105O95561 183 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 GJA5P36382 358 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 TGFBR3Q03167 851 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 GLO1Q04760 184 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 EGFL6Q8IUX8 553 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 MCATQ8IVS2 390 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 OR4M2Q8NGB6 313 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 OR6Q1Q8NGQ2 317 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 MZB1Q8WU39 189 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 C7orf34Q96L11 122 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 CDC6Q99741 560 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 NUBP2Q9Y5Y2 271 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 GCH1P30793 250 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 DCAF7P61962 342 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 FRMPD2BQ6IN97 320 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF765Q7L2R6 523 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 PARS2Q7L3T8 475 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 RETREG3Q86VR2 466 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 PDZD9Q8IXQ8 264 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 ZNF480Q8WV37 535 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 EGLN2Q96KS0 407 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 TSNAXQ99598 290 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 CPPED1Q9BRF8 314 aaPredicted RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 C7orf72A4D263 438 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 POLR2HP52434 150 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 SRYQ05066 204 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 OR52E1Q8NGJ3 308 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 SPIN2AQ99865 258 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 SPIN2BQ9BPZ2 258 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 CLDN24A6NM45 220 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 CD34P28906 385 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 CYCSP99999 105 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 TAP2Q03519 686 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 TMEM201Q5SNT2 666 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 TAS1R1Q7RTX1 841 aa18■□□□□ 0.47
COL27A1-207ENST00000494090 MRPL21Q7Z2W9 205 aaKnown RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 ACOT11Q8WXI4 607 aaPredicted RBP18■□□□□ 0.47
COL27A1-207ENST00000494090 GJB3O75712 270 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms