RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ARSKQ6UWY0 536 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 MEX3BQ6ZN04 569 aaKnown RBP20.45■□□□□ 0.86
SNIP1-203ENST00000493916 GDF7Q7Z4P5 450 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 C9orf106Q8NAJ2 232 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 WNT2BQ93097 391 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 ZFP3Q96NJ6 502 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 OR52B2Q96RD2 323 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 SDF2Q99470 211 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 TM9SF2Q99805 663 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 SDR39U1Q9NRG7 319 aaPredicted RBP20.45■□□□□ 0.86
SNIP1-203ENST00000493916 ZIM2Q9NZV7 527 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF337Q9Y3M9 751 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 NOTCH2Q04721 2471 aa20.45■□□□□ 0.86
SNIP1-203ENST00000493916 C7orf72A4D263 438 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 C9JVG2 144 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 DIAPH2O60879 1101 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 SLC22A3O75751 556 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 TGDSO95455 350 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 AGR2O95994 175 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 PPP2R2AP63151 447 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 ARHGAP11BQ3KRB8 267 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNIP1-203ENST00000493916 HEPHL1Q6MZM0 1159 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 MEIOBQ8N635 442 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 RELL2Q8NC24 303 aaPredicted RBP20.44■□□□□ 0.86
SNIP1-203ENST00000493916 B4GALNT2Q8NHY0 566 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 DYDC1Q8WWB3 177 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 ZBTB8AQ96BR9 441 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 OR52E6Q96RD3 313 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 SLC35A5Q9BS91 424 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 NMUR2Q9GZQ4 415 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 OR51I1Q9H343 314 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 SLCO1B3Q9NPD5 702 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 AP4B1Q9Y6B7 739 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 HCFC1P51610 2035 aa20.44■□□□□ 0.86
SNIP1-203ENST00000493916 KIAA1549Q9HCM3 1950 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 NPIPA5A0A0B4J1W7 369 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 NPIPA7E9PJI5 369 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 H3BNH8 94 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 UBDO15205 165 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 GMFGO60234 142 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 IL18BPO95998 194 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 IL6P05231 212 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 GUSBP08236 651 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 NPIPA8P0DM63 369 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 BMP5P22003 454 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 CTSSP25774 331 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 KHKP50053 298 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 EEFSECP57772 596 aaKnown RBP20.43■□□□□ 0.86
SNIP1-203ENST00000493916 PLPPR5Q32ZL2 321 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 DMRTC2Q8IXT2 367 aaPredicted RBP20.43■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF295-AS1Q8N0V1 137 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 GTPBP8Q8N3Z3 284 aaPredicted RBP20.43■□□□□ 0.86
SNIP1-203ENST00000493916 TRIML2Q8N7C3 387 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 OR5M1Q8NGP8 315 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 SH3YL1Q96HL8 342 aaPredicted RBP20.43■□□□□ 0.86
SNIP1-203ENST00000493916 MARK4Q96L34 752 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 PANX1Q96RD7 426 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF350Q9GZX5 532 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 INTS9Q9NV88 658 aaKnown RBP20.43■□□□□ 0.86
SNIP1-203ENST00000493916 MED17Q9NVC6 651 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 EXD2Q9NVH0 621 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 VDAC3Q9Y277 283 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 DTNAQ9Y4J8 743 aa20.43■□□□□ 0.86
SNIP1-203ENST00000493916 MED12Q93074 2177 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 STX11O75558 287 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 SASH3O75995 380 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 RCBTB2O95199 551 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 OPRM1P35372 400 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 CHI3L1P36222 383 aaPredicted RBP20.42■□□□□ 0.86
SNIP1-203ENST00000493916 ASCL1P50553 236 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF41P51814 821 aaPredicted RBP20.42■□□□□ 0.86
SNIP1-203ENST00000493916 SUMO3P55854 103 aaPredicted RBP20.42■□□□□ 0.86
SNIP1-203ENST00000493916 TXNL4AP83876 142 aaKnown RBP20.42■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF117Q03924 483 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 ATAD3BQ5T9A4 648 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 C16orf62Q7Z3J2 963 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 PHOSPHO1Q8TCT1 267 aa20.42■□□□□ 0.86
SNIP1-203ENST00000493916 NUP214P35658 2090 aaPredicted RBP20.41■□□□□ 0.86
SNIP1-203ENST00000493916 CCDC154A6NI56 674 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 H3BML4 177 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 TMIGD3P0DMS9 266 aaPredicted RBP20.41■□□□□ 0.86
SNIP1-203ENST00000493916 SSTR2P30874 369 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 MRPL19P49406 292 aaKnown RBP20.41■□□□□ 0.86
SNIP1-203ENST00000493916 CASP9P55211 416 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 CLDN15P56746 228 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 ZNF141Q15928 474 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 FBXL19-AS1Q494R0 122 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 AP1ARQ63HQ0 302 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 TNFAIP8L2Q6P589 184 aaPredicted RBP20.41■□□□□ 0.86
SNIP1-203ENST00000493916 MSANTD1Q6ZTZ1 278 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 CHMP1BQ7LBR1 199 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 GRAMD2AQ8IUY3 354 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 UBQLNLQ8IYU4 475 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 OIT3Q8WWZ8 545 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 C14orf79Q96F83 325 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 INPP5KQ9BT40 448 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 SFXN3Q9BWM7 321 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 ACBD3Q9H3P7 528 aa20.41■□□□□ 0.86
SNIP1-203ENST00000493916 SLC24A3Q9HC58 644 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms