RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SEC14L3Q9UDX4 400 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 POMPQ9Y244 141 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 DOPEY2Q9Y3R5 2298 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 A1L4Q6 167 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SCDO00767 359 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ZNF682O95780 498 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 DBIP07108 87 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 GUSBP08236 651 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ETS2P15036 469 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 IL7RP16871 459 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ATP6V1B2P21281 511 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 LCN1P31025 176 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 HLCSP50747 726 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ATP12AP54707 1039 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 PCBP3P57721 371 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 LARS2Q15031 903 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 NTRK2Q16620 822 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ZNF311Q5JNZ3 666 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 PDZK1Q5T2W1 519 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ZNF468Q5VIY5 522 aaPredicted RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 SLC25A25Q6KCM7 469 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 CCDC80Q76M96 950 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 GALNTL5Q7Z4T8 443 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 VRK2Q86Y07 508 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 GPALPP1Q8IXQ4 340 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 CYP4Z2PQ8N1L4 340 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SMYD1Q8NB12 490 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 OR10G3Q8NGC4 313 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 WDR60Q8WVS4 1066 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ZG16BQ96DA0 208 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 TAAR6Q96RI8 345 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 NODALQ96S42 347 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SLX1AQ9BQ83 275 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 HES7Q9BYE0 225 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SAP130Q9H0E3 1048 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 UBQLN4Q9NRR5 601 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 ADPRHL2Q9NX46 363 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 KLRF1Q9NZS2 232 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SLC13A4Q9UKG4 626 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 ZNF232Q9UNY5 417 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 IFT52Q9Y366 437 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
MSH6-208ENST00000493177 V9GYQ6 96 aa12.29□□□□□ -0.44
MSH6-208ENST00000493177 SCO2O43819 266 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 GCM2O75603 506 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 SLC25A12O75746 678 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 UGT2B17O75795 530 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 OXSR1O95747 527 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 SP1P08047 785 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 PABPC4LP0CB38 370 aaKnown RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 GP1BBP13224 206 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 TBXA2RP21731 343 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 EVI2BP34910 448 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 ERFP50548 548 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 CASP6P55212 293 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 MAPK14Q16539 360 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 FXNQ16595 210 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 ZNF791Q3KP31 576 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 LIN52Q52LA3 116 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 CYBRD1Q53TN4 286 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 LCN8Q6JVE9 175 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 RTL4Q6ZR62 310 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 SPATA24Q86W54 205 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 GATSQ8NAP1 163 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 MDS2Q8NDY4 140 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 BHLHE22Q8NFJ8 381 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 OR4C3Q8NH37 302 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 PMM1Q92871 262 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 HGDQ93099 445 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 TAMM41Q96BW9 452 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 TPD52L3Q96J77 140 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 TBL1XR1Q9BZK7 514 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 METTL7AQ9H8H3 244 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 ERRFI1Q9UJM3 462 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 RPS6KA6Q9UK32 745 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 SAMD4AQ9UPU9 718 aaKnown RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 ZNF443Q9Y2A4 671 aaPredicted RBP12.28□□□□□ -0.44
MSH6-208ENST00000493177 PCDHGB6Q9Y5F9 930 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 DSPPQ9NZW4 1301 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 NBASA2RRP1 2371 aa12.28□□□□□ -0.44
MSH6-208ENST00000493177 SVILO95425 2214 aa12.27□□□□□ -0.44
MSH6-208ENST00000493177 TRGV8A0A0C4DH27 118 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 CENPVL1A0A0U1RR11 272 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 PRAMEF25A6NGN4 478 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 AGAP5A6NIR3 686 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 H3BNH8 94 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 ACOT8O14734 319 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 LRRTM2O43300 516 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 MFN2O95140 757 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 P04436 131 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 DMTNQ08495 405 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 ZNF141Q15928 474 aa12.27□□□□□ -0.45
MSH6-208ENST00000493177 C4orf17Q53FE4 359 aa12.27□□□□□ -0.45
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