RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 POU4F3Q15319 338 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 DUSP5Q16690 384 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 ZNF385BQ569K4 471 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 FIGNL1Q6PIW4 674 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 BEND4Q6ZU67 534 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 BIVMQ86UB2 503 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 TRABD2AQ86V40 505 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 ZNF610Q8N9Z0 462 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 OR56A1Q8NGH5 318 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 B4GALNT2Q8NHY0 566 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 PSMA8Q8TAA3 256 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 ADAMTS15Q8TE58 950 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 JADE3Q92613 823 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 ARL8AQ96BM9 186 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 FAM120BQ96EK7 910 aaKnown RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 CHMP6Q96FZ7 201 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 REXO5Q96IC2 774 aaKnown RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 ACTRT3Q9BYD9 372 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 OPN3Q9H1Y3 402 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 KLHL28Q9NXS3 571 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 LGALS13Q9UHV8 139 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 DUXAA6NLW8 204 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 PIP5K1BO14986 540 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SCAMP2O15127 329 aaKnown RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SMPD2O60906 423 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SS18L1O75177 396 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SNUPNO95149 360 aaKnown RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 HMGN2P05204 90 aaKnown RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 CHRNGP07510 517 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 ACP2P11117 423 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 CCT3P49368 545 aaKnown RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SUMO3P55854 103 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 GUSBP1Q15486 140 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 ACKR1Q16570 336 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 PLPPR5Q32ZL2 321 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SPDYE7PQ495Y7 208 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 PPP4R4Q6NUP7 873 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 CDC73Q6P1J9 531 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 C20orf204Q6ZNR8 217 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 P3H2Q8IVL5 708 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 OR10D3Q8NH80 312 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 OR2V1Q8NHB1 315 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 CLHC1Q8NHS4 586 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 COQ8BQ96D53 544 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 C16orf58Q96GQ5 468 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 C18orf12Q96KH6 178 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 HDHD5Q9BXW7 423 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 DLL4Q9NR61 685 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 MED17Q9NVC6 651 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 C6orf203Q9P0P8 240 aaPredicted RBP11.18□□□□□ -0.62
COL6A1-205ENST00000492851 SNX8Q9Y5X2 465 aa11.18□□□□□ -0.62
COL6A1-205ENST00000492851 NF1P21359 2839 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 SETD2Q9BYW2 2564 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 DEFB108AA8MXU0 73 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 GMFGO60234 142 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 TMCC2O75069 709 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 PEX11AO75192 247 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 AQP8O94778 261 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 SLU7O95391 586 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 PSMA4P25789 261 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 ELK4P28324 431 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 NR1H2P55055 460 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 CARD18P57730 90 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 LASP1Q14847 261 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 RNPS1Q15287 305 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 SMU1Q2TAY7 513 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 KLHL26Q53HC5 615 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 XKR7Q5GH72 579 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 EXOSC6Q5RKV6 272 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 C6orf136Q5SQH8 315 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 HBMQ6B0K9 141 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 EMBQ6PCB8 327 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 PRSS57Q6UWY2 283 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 LILRA2Q8N149 483 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 PHOSPHO1Q8TCT1 267 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 SFXN5Q8TD22 340 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 TCP10LQ8TDR4 215 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 PIK3IP1Q96FE7 263 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 ADGRG7Q96K78 797 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 RNF145Q96MT1 663 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 KLHL4Q9C0H6 718 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 BHLHE41Q9C0J9 482 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 GPR52Q9Y2T5 361 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 ACTL7BQ9Y614 415 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 GPC6Q9Y625 555 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-205ENST00000492851 DOCK7Q96N67 2140 aa11.17□□□□□ -0.62
COL6A1-205ENST00000492851 MED13LQ71F56 2210 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 KIAA1549Q9HCM3 1950 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 GTPBP1O00178 669 aaKnown RBP11.16□□□□□ -0.62
COL6A1-205ENST00000492851 DIAPH2O60879 1101 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 NUDT14O95848 222 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 TUBBP07437 444 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 LINGO3P0C6S8 592 aa11.16□□□□□ -0.62
COL6A1-205ENST00000492851 LAMP1P11279 417 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms