RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 C20orf96Q9NUD7 363 aaPredicted RBP2.78□□□□□ -1.96
VPS36-205ENST00000492650 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.78□□□□□ -1.96
VPS36-205ENST00000492650 RNF186Q9NXI6 227 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 PLEK2Q9NYT0 353 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 IL20Q9NYY1 176 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 TECRQ9NZ01 308 aaKnown RBP2.78□□□□□ -1.96
VPS36-205ENST00000492650 STX18Q9P2W9 335 aaKnown RBP2.78□□□□□ -1.96
VPS36-205ENST00000492650 KLK13Q9UKR3 277 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 VANGL2Q9ULK5 521 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 RNF6Q9Y252 685 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 ZNF175Q9Y473 711 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 PPIAL4AQ9Y536 164 aa2.78□□□□□ -1.96
VPS36-205ENST00000492650 PNPLA6Q8IY17 1366 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 GAKO14976 1311 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TRAV6A0A075B6T7 132 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 A0A1B0GUH1 482 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TUBAL3A6NHL2 446 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 WASHC1A8K0Z3 465 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 A8MU76 341 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 RSPH10B2B2RC85 870 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ZNF732B4DXR9 585 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 C2CD4DB7Z1M9 353 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 HIP1O00291 1037 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 LSM1O15116 133 aaKnown RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 TSPAN2O60636 221 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TPST2O60704 377 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 OR2F2O95006 317 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 NXPH2O95156 264 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 H6PDO95479 791 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CST1P01037 141 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 RSPH10BP0C881 870 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 POU2F1P14859 743 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ACKR3P25106 362 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ALDH1B1P30837 517 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CASP14P31944 242 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 SPAM1P38567 509 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 MATKP42679 507 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CASP4P49662 377 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CCNG1P51959 295 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 NDST1P52848 882 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 PLA2G16P53816 162 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 UBE2IP63279 158 aaKnown RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 MFGE8Q08431 387 aaPredicted RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 ZNF177Q13360 481 aaPredicted RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 OPCMLQ14982 345 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 STK38Q15208 465 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 NECTIN1Q15223 517 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 MICBQ29980 383 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 GGTA1PQ4G0N0 100 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 HSP90AA4PQ58FG1 418 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CLEC6AQ6EIG7 209 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 SLC27A4Q6P1M0 643 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TTC23LQ6PF05 361 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 KCNIP4Q6PIL6 250 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 DPY19L2P2Q6ZN68 376 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 GPBP1Q86WP2 473 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 VRK2Q86Y07 508 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TMEM139Q8IV31 216 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 RCOR2Q8IZ40 523 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 FAM58AQ8N1B3 248 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ALLCQ8N6M5 410 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TRPV1Q8NER1 839 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 OR4D5Q8NGN0 318 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 OR4C3Q8NH37 302 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 NDNFQ8TB73 568 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 LRRC20Q8TCA0 184 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CCDC12Q8WUD4 166 aaPredicted RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 TCP11Q8WWU5 503 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 LHX4Q969G2 390 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 BPIFA2Q96DR5 249 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 AMDHD1Q96NU7 426 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TECTBQ96PL2 329 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 RIT2Q99578 217 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CCDC3Q9BQI4 270 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CCM2Q9BSQ5 444 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 FUCA2Q9BTY2 467 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 C20orf24Q9BUV8 137 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 LRRC61Q9BV99 259 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ST6GALNAC5Q9BVH7 336 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 DGCR6LQ9BY27 220 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 PARD6BQ9BYG5 372 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 NLNQ9BYT8 704 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 MTIF3Q9H2K0 278 aaKnown RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 NARFLQ9H6Q4 476 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 SMYD3Q9H7B4 428 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 MTHFD2LQ9H903 347 aaPredicted RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 IL1RL2Q9HB29 575 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 POLD4Q9HCU8 107 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 MRPS30Q9NP92 439 aaKnown RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 AHSPQ9NZD4 102 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CTSFQ9UBX1 484 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 TP53TG3Q9ULZ0 132 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 ABCG2Q9UNQ0 655 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 KLHDC2Q9Y2U9 406 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CSDC2Q9Y534 153 aaKnown RBP2.77□□□□□ -1.97
VPS36-205ENST00000492650 OR1A2Q9Y585 309 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 COLEC10Q9Y6Z7 277 aa2.77□□□□□ -1.97
VPS36-205ENST00000492650 CCDC7Q96M83 1385 aa2.76□□□□□ -1.97
VPS36-205ENST00000492650 TRBV11-1A0A0K0K1C0 115 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms