RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 KLHDC3Q9BQ90 382 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 CLEC4MQ9H2X3 399 aaPredicted RBP13.51□□□□□ -0.25
TOM1-215ENST00000491987 PIGMQ9H3S5 423 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 RASSF1Q9NS23 344 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 PNPOQ9NVS9 261 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 TACC2O95359 2948 aa13.51□□□□□ -0.25
TOM1-215ENST00000491987 AKAP9Q99996 3911 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 A0A087WZY1 265 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 A0A1W2PQD3 144 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 EIF1AYO14602 144 aaKnown RBP13.5□□□□□ -0.25
TOM1-215ENST00000491987 SMNDC1O75940 238 aaKnown RBP eCLIP13.5□□□□□ -0.25
TOM1-215ENST00000491987 ZNF17P17021 662 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 CPOXP36551 454 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 ZNF41P51814 821 aaPredicted RBP13.5□□□□□ -0.25
TOM1-215ENST00000491987 RPS3AP61247 264 aaKnown RBP13.5□□□□□ -0.25
TOM1-215ENST00000491987 RPS26P62854 115 aaKnown RBP13.5□□□□□ -0.25
TOM1-215ENST00000491987 BST1Q10588 318 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 PON3Q15166 354 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 PPP4R4Q6NUP7 873 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 VWA1Q6PCB0 445 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 MISPQ8IVT2 679 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 OR5D16Q8NGK9 328 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 B4GALNT2Q8NHY0 566 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 FNDC9Q8TBE3 224 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 PHOSPHO1Q8TCT1 267 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 MGARPQ8TDB4 240 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 RNF145Q96MT1 663 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 OR7D2Q96RA2 312 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 DPY30Q9C005 99 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 MED17Q9NVC6 651 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 HAO1Q9UJM8 370 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 ZNF175Q9Y473 711 aa13.5□□□□□ -0.25
TOM1-215ENST00000491987 RNF103-CHMP3A0A140T963 221 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 TMEM120BA0PK00 339 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 FAM221AA4D161 298 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 A8MXE2 369 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 OPN1LWP04000 364 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 CRHP06850 196 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 EPXP11678 715 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 DNAJA1P31689 397 aaKnown RBP13.49□□□□□ -0.25
TOM1-215ENST00000491987 EEF1A1P68104 462 aaKnown RBP13.49□□□□□ -0.25
TOM1-215ENST00000491987 ZNF117Q03924 483 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 SGCBQ16585 318 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 PLPPR5Q32ZL2 321 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 EEF1A1P5Q5VTE0 462 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 FBXW10Q5XX13 1052 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 BHLHB9Q6PI77 547 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 KIRREL3Q8IZU9 778 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 GTPBP8Q8N3Z3 284 aaPredicted RBP13.49□□□□□ -0.25
TOM1-215ENST00000491987 METTL25Q8N6Q8 603 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 ZNF614Q8N883 585 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 ZNF527Q8NB42 609 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 OR4A15Q8NGL6 344 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 ACTRT2Q8TDY3 377 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 ZBTB8AQ96BR9 441 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 STARD4Q96DR4 205 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 SLC35G5Q96KT7 338 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 SERHL2Q9H4I8 314 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 TMEM185BQ9H7F4 350 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 RNF122Q9H9V4 155 aa13.49□□□□□ -0.25
TOM1-215ENST00000491987 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 MSTNO14793 375 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 OIP5O43482 229 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 CPSF4O95639 269 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 LBPP18428 481 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 MATN1P21941 496 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 PSMA4P25789 261 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 EIF1AXP47813 144 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 DAZAP2Q15038 168 aaPredicted RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 TESK1Q15569 626 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
TOM1-215ENST00000491987 C6orf120Q7Z4R8 191 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 BTLAQ7Z6A9 289 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 ANKRD46Q86W74 232 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 CDC20BQ86Y33 519 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 WDR75Q8IWA0 830 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 POC1BQ8TC44 478 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 HOXD1Q9GZZ0 328 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 OPN3Q9H1Y3 402 aaPredicted RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 LIME1Q9H400 295 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 MEAF6Q9HAF1 191 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 CARD8Q9Y2G2 431 aa13.48□□□□□ -0.25
TOM1-215ENST00000491987 ANKRD17O75179 2603 aaKnown RBP13.48□□□□□ -0.25
TOM1-215ENST00000491987 PCNX3Q9H6A9 2034 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 C7orf72A4D263 438 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 SH3D21A4FU49 640 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 ANKRD28O15084 1053 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 CXCL13O43927 109 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 SCN2BO60939 215 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 ERLIN1O75477 346 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 AQP8O94778 261 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 SOX30O94993 753 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 NUDT14O95848 222 aa13.47□□□□□ -0.25
TOM1-215ENST00000491987 LINGO3P0C6S8 592 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms