RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 SFXN5Q8TD22 340 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 EPS8L3Q8TE67 593 aaKnown RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 OIT3Q8WWZ8 545 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 OR5P2Q8WZ92 322 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 FIG4Q92562 907 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 PIK3R3Q92569 461 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 GIMAP5Q96F15 307 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 TSSK3Q96PN8 268 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 HDHD5Q9BXW7 423 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 ACTRT3Q9BYD9 372 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 PIGUQ9H490 435 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 GSX1Q9H4S2 264 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 L2HGDHQ9H9P8 463 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 GP6Q9HCN6 339 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 PLSCR4Q9NRQ2 329 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 FAF1Q9UNN5 650 aaPredicted RBP7.87□□□□□ -1.15
NUP50-217ENST00000491860 VDAC3Q9Y277 283 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 FIS1Q9Y3D6 152 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 TRAF6Q9Y4K3 522 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 ARID1AO14497 2285 aa7.87□□□□□ -1.15
NUP50-217ENST00000491860 TLDC2A0PJX2 215 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 GXYLT2A0PJZ3 443 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 DUXAA6NLW8 204 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 AKAP10O43572 662 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 SMPD2O60906 423 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 NME6O75414 186 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 AK1P00568 194 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 CGAP01215 116 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 ACP2P11117 423 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 BCKDHAP12694 445 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 CD53P19397 219 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 PRPS1L1P21108 318 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 HOXC12P31275 282 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 CLDN20P56880 219 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 SIRPAP78324 504 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 NKX6-1P78426 367 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 LTBQ06643 244 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 FAM27E3Q08E93 113 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 POU4F3Q15319 338 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 DUSP5Q16690 384 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 PRSS53Q2L4Q9 553 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 SMU1Q2TAY7 513 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 PLPPR5Q32ZL2 321 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 GALNTL6Q49A17 601 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 XKR7Q5GH72 579 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 ARL13AQ5H913 290 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 BEX5Q5H9J7 111 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 CDC73Q6P1J9 531 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 EMBQ6PCB8 327 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 ZNF474Q6S9Z5 364 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 GGNQ86UU5 652 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 BANPQ8N9N5 519 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 SLC16A11Q8NCK7 471 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 TOR1AIP2Q8NFQ8 470 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 OR2V1Q8NHB1 315 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 PSMA8Q8TAA3 256 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 ADAMTS15Q8TE58 950 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 JADE3Q92613 823 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 CPNE4Q96A23 557 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 FAM120BQ96EK7 910 aaKnown RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 CHMP6Q96FZ7 201 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 C18orf12Q96KH6 178 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 WFIKKN1Q96NZ8 548 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 BHLHE41Q9C0J9 482 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 OPN3Q9H1Y3 402 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 ZCCHC3Q9NUD5 404 aaKnown RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 MED17Q9NVC6 651 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 FLRT3Q9NZU0 649 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 LGALS13Q9UHV8 139 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 ACTL7BQ9Y614 415 aa7.86□□□□□ -1.15
NUP50-217ENST00000491860 GPC6Q9Y625 555 aaPredicted RBP7.86□□□□□ -1.15
NUP50-217ENST00000491860 B4DXG7 233 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 PIP5K1BO14986 540 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 AGR2O95994 175 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 IGKV1D-16P01601 117 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 HMGN2P05204 90 aaKnown RBP7.85□□□□□ -1.15
NUP50-217ENST00000491860 TUBBP07437 444 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 ADSLP30566 484 aaPredicted RBP7.85□□□□□ -1.15
NUP50-217ENST00000491860 ALDH3A1P30838 453 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 CCT3P49368 545 aaKnown RBP7.85□□□□□ -1.15
NUP50-217ENST00000491860 P2RX1P51575 399 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 C21orf58P58505 322 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 ACKR1Q16570 336 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 SPDYE7PQ495Y7 208 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 ZNF385BQ569K4 471 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 EXOSC6Q5RKV6 272 aaKnown RBP7.85□□□□□ -1.15
NUP50-217ENST00000491860 FAM219BQ5XKK7 198 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 HBMQ6B0K9 141 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 ANKRD26P1Q6NSI1 321 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 PPP4R4Q6NUP7 873 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 APOOLQ6UXV4 268 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 SLC43A2Q8N370 569 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 FNDC5Q8NAU1 212 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 STEAP2Q8NFT2 490 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 OR2T11Q8NH01 316 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 OR4C3Q8NH37 302 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 OR10D3Q8NH80 312 aa7.85□□□□□ -1.15
NUP50-217ENST00000491860 COQ8BQ96D53 544 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms