RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 DHRS4-AS1Q9P1J3 65 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CPSF2Q9P2I0 782 aaKnown RBP2.59□□□□□ -1.99
PHC3-213ENST00000491258 SLC12A6Q9UHW9 1150 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 RWDD2AQ9UIY3 292 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 SCML1Q9UN30 329 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 NCKAP1Q9Y2A7 1128 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 PTPRSQ13332 1948 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 CEP295Q9C0D2 2601 aa2.59□□□□□ -1.99
PHC3-213ENST00000491258 WDR87Q6ZQQ6 2873 aa2.59□□□□□ -2
PHC3-213ENST00000491258 SPTBN2O15020 2390 aa2.58□□□□□ -2
PHC3-213ENST00000491258 VPS13AQ96RL7 3174 aa2.58□□□□□ -2
PHC3-213ENST00000491258 SYNJ2BP-COX16A0A087WUM0 186 aa2.58□□□□□ -2
PHC3-213ENST00000491258 A0A1W2PPM1 405 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GTPBP10A4D1E9 387 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 FAM149AA5PLN7 773 aa2.58□□□□□ -2
PHC3-213ENST00000491258 TRABD2BA6NFA1 517 aa2.58□□□□□ -2
PHC3-213ENST00000491258 FAM47DPA6NHR8 397 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GLOD5A6NK44 160 aa2.58□□□□□ -2
PHC3-213ENST00000491258 F5H5T6 163 aa2.58□□□□□ -2
PHC3-213ENST00000491258 TRIM77I1YAP6 450 aa2.58□□□□□ -2
PHC3-213ENST00000491258 K7ERQ8 282 aa2.58□□□□□ -2
PHC3-213ENST00000491258 MCF2LO15068 1137 aa2.58□□□□□ -2
PHC3-213ENST00000491258 HSF2BPO75031 334 aa2.58□□□□□ -2
PHC3-213ENST00000491258 RTN2O75298 545 aa2.58□□□□□ -2
PHC3-213ENST00000491258 CLDN11O75508 207 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GRAP2O75791 330 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ZMPSTE24O75844 475 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GFPT2O94808 682 aa2.58□□□□□ -2
PHC3-213ENST00000491258 KBTBD11O94819 623 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ADCY5O95622 1261 aa2.58□□□□□ -2
PHC3-213ENST00000491258 FGFR1OPO95684 399 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 LDOC1O95751 146 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 APOEP02649 317 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GIFP27352 417 aa2.58□□□□□ -2
PHC3-213ENST00000491258 PSMD8P48556 350 aa2.58□□□□□ -2
PHC3-213ENST00000491258 STK19P49842 368 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 CDH4P55283 916 aa2.58□□□□□ -2
PHC3-213ENST00000491258 CNTN1Q12860 1018 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OVGP1Q12889 678 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ELAVL3Q14576 367 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 NPTX1Q15818 432 aa2.58□□□□□ -2
PHC3-213ENST00000491258 CAMK4Q16566 473 aa2.58□□□□□ -2
PHC3-213ENST00000491258 EXOC3L4Q17RC7 722 aa2.58□□□□□ -2
PHC3-213ENST00000491258 PTPN20Q4JDL3 420 aa2.58□□□□□ -2
PHC3-213ENST00000491258 RABGAP1LQ5R372 815 aa2.58□□□□□ -2
PHC3-213ENST00000491258 FAM46CQ5VWP2 391 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OR6B2Q6IFH4 312 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GBP6Q6ZN66 633 aa2.58□□□□□ -2
PHC3-213ENST00000491258 TIFABQ6ZNK6 161 aa2.58□□□□□ -2
PHC3-213ENST00000491258 C11orf57Q6ZUT1 292 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 FAM183BPQ6ZVS7 135 aa2.58□□□□□ -2
PHC3-213ENST00000491258 BNIPLQ7Z465 357 aa2.58□□□□□ -2
PHC3-213ENST00000491258 TRIM69Q86WT6 500 aa2.58□□□□□ -2
PHC3-213ENST00000491258 FAM71AQ8IYT1 594 aa2.58□□□□□ -2
PHC3-213ENST00000491258 DEFB106AQ8N104 65 aa2.58□□□□□ -2
PHC3-213ENST00000491258 CCAR2Q8N163 923 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 SLC25A45Q8N413 288 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ATP6V0D2Q8N8Y2 350 aa2.58□□□□□ -2
PHC3-213ENST00000491258 MLKLQ8NB16 471 aa2.58□□□□□ -2
PHC3-213ENST00000491258 TSPAN14Q8NG11 270 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OR52K2Q8NGK3 314 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OR6T1Q8NGN1 323 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OR5M9Q8NGP3 310 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OR2A12Q8NGT7 310 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ROBO4Q8WZ75 1007 aa2.58□□□□□ -2
PHC3-213ENST00000491258 PGAP3Q96FM1 320 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 PPP1R16AQ96I34 528 aa2.58□□□□□ -2
PHC3-213ENST00000491258 RPRD1AQ96P16 312 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 NPY6RQ99463 290 aa2.58□□□□□ -2
PHC3-213ENST00000491258 OMDQ99983 421 aa2.58□□□□□ -2
PHC3-213ENST00000491258 CCDC106Q9BWC9 280 aa2.58□□□□□ -2
PHC3-213ENST00000491258 MRPL1Q9BYD6 325 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 CDH20Q9HBT6 801 aa2.58□□□□□ -2
PHC3-213ENST00000491258 GDF3Q9NR23 364 aa2.58□□□□□ -2
PHC3-213ENST00000491258 PIGVQ9NUD9 493 aa2.58□□□□□ -2
PHC3-213ENST00000491258 DDIT4Q9NX09 232 aa2.58□□□□□ -2
PHC3-213ENST00000491258 COX16Q9P0S2 106 aa2.58□□□□□ -2
PHC3-213ENST00000491258 RSPH14Q9UHP6 348 aa2.58□□□□□ -2
PHC3-213ENST00000491258 DNAJC12Q9UKB3 198 aa2.58□□□□□ -2
PHC3-213ENST00000491258 ZNF346Q9UL40 294 aaKnown RBP2.58□□□□□ -2
PHC3-213ENST00000491258 PCDHGA1Q9Y5H4 931 aa2.58□□□□□ -2
PHC3-213ENST00000491258 MAGED1Q9Y5V3 778 aaPredicted RBP2.58□□□□□ -2
PHC3-213ENST00000491258 MYH8P13535 1937 aa2.58□□□□□ -2
PHC3-213ENST00000491258 KIAA1217Q5T5P2 1943 aa2.58□□□□□ -2
PHC3-213ENST00000491258 A0A087WV48 116 aa2.57□□□□□ -2
PHC3-213ENST00000491258 A0A0D9SEW6 157 aa2.57□□□□□ -2
PHC3-213ENST00000491258 hCG_1809904A0A1W2PP81 198 aa2.57□□□□□ -2
PHC3-213ENST00000491258 A0A1W2PPE2 198 aa2.57□□□□□ -2
PHC3-213ENST00000491258 A0A1W2PR64 198 aa2.57□□□□□ -2
PHC3-213ENST00000491258 ILVBLA1L0T0 632 aa2.57□□□□□ -2
PHC3-213ENST00000491258 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
PHC3-213ENST00000491258 ALOX15BO15296 676 aa2.57□□□□□ -2
PHC3-213ENST00000491258 SLC31A1O15431 190 aa2.57□□□□□ -2
PHC3-213ENST00000491258 YKT6O15498 198 aa2.57□□□□□ -2
PHC3-213ENST00000491258 SLC7A4O43246 635 aa2.57□□□□□ -2
PHC3-213ENST00000491258 LSM8O95777 96 aaKnown RBP2.57□□□□□ -2
PHC3-213ENST00000491258 CD160O95971 181 aa2.57□□□□□ -2
PHC3-213ENST00000491258 IL1BP01584 269 aa2.57□□□□□ -2
PHC3-213ENST00000491258 CTSLP07711 333 aa2.57□□□□□ -2
PHC3-213ENST00000491258 PNMA6AP0CW24 399 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms