RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 MDGA2Q7Z553 956 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 ZADH2Q8N4Q0 377 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 GPR32P1Q8NGA4 272 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 PHOSPHO1Q8TCT1 267 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 PROX1Q92786 737 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 SLC35B4Q969S0 331 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 NTNG2Q96CW9 530 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 DOHHQ9BU89 302 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 TUBD1Q9UJT1 453 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 SLC13A4Q9UKG4 626 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 WIF1Q9Y5W5 379 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 CELSR3Q9NYQ7 3312 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 ACACBO00763 2458 aa17.05■□□□□ 0.32
MCF2L-230ENST00000491028 KMT2BQ9UMN6 2715 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 TMEM229AB2RXF0 380 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 ADAM10O14672 748 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 TPST1O60507 370 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 SNX4O95219 450 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CSTAP01040 98 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 FESP07332 822 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 UBL4AP11441 157 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CD46P15529 392 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 TNFSF10P50591 281 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 GAS1P54826 345 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 C17orf67Q0P5P2 114 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CD226Q15762 336 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 PRAMEF20Q5VT98 475 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 SPINK14Q6IE38 97 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 MARCH3Q86UD3 253 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 SPATA24Q86W54 205 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 FAM71CQ8NEG0 241 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 HSH2DQ96JZ2 352 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 C5orf34Q96MH7 638 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 FRMD6Q96NE9 622 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.04■□□□□ 0.32
MCF2L-230ENST00000491028 ADNPQ9H2P0 1102 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 EXOSC3Q9NQT5 275 aaKnown RBP17.04■□□□□ 0.32
MCF2L-230ENST00000491028 KLF13Q9Y2Y9 288 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-230ENST00000491028 PCDHGB6Q9Y5F9 930 aa17.04■□□□□ 0.32
MCF2L-230ENST00000491028 CFAP47Q6ZTR5 3102 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 TCRBV3S1A0A5B6 114 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 CLDN24A6NM45 220 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GTPBP1O00178 669 aaKnown RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 ZNF264O43296 627 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 NME2P1O60361 137 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 EIF4E2O60573 245 aaKnown RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 PRKD3O94806 890 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 LGI1O95970 557 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GPIP06744 558 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 SP1P08047 785 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 UMPSP11172 480 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 HOXB6P17509 224 aaKnown RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 CNR1P21554 472 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 NME2P22392 152 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 ACTR3P61158 418 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 RHDQ02161 417 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 KCNAB2Q13303 367 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 NRF1Q16656 503 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 IFI44LQ53G44 452 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 BICRALQ6AI39 1079 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 SLC25A25Q6KCM7 469 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 ZNF440Q8IYI8 595 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 CLIP4Q8N3C7 705 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GATSQ8NAP1 163 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 TMEM178AQ8NBL3 297 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GEMIN6Q8WXD5 167 aaKnown RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 SCMH1Q96GD3 660 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 TMEM41AQ96HV5 264 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 PYURFQ96I23 114 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 TPD52L3Q96J77 140 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 ARHGDIGQ99819 225 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 ARHGAP9Q9BRR9 750 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 RSPO3Q9BXY4 272 aaPredicted RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 UGT2B28Q9BY64 529 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 RTN4RQ9BZR6 473 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 GALNT9Q9HCQ5 603 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 DNAJB12Q9NXW2 375 aaKnown RBP17.03■□□□□ 0.32
MCF2L-230ENST00000491028 SLC9A8Q9Y2E8 581 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 CHST2Q9Y4C5 530 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 EPG5Q9HCE0 2579 aa17.03■□□□□ 0.32
MCF2L-230ENST00000491028 IGLV3-32A0A0A0MS00 114 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 TRAV17A0A0B4J275 112 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 EPPINO95925 133 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 PLAURQ03405 335 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 CCNIQ14094 377 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 KPNB1Q14974 876 aaKnown RBP17.02■□□□□ 0.32
MCF2L-230ENST00000491028 LINC00303Q3SY05 128 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 ENPP6Q6UWR7 440 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 FKBP9P1Q75LS8 142 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 C10orf67Q8IYJ2 551 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 TOR1AIP2Q8NFQ8 470 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 ABHD17AQ96GS6 310 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 CRELD1Q96HD1 420 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 RSRC1Q96IZ7 334 aaKnown RBP17.02■□□□□ 0.32
MCF2L-230ENST00000491028 FAM173AQ9BQD7 235 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 LAT2Q9GZY6 243 aa17.02■□□□□ 0.32
MCF2L-230ENST00000491028 DENND2DQ9H6A0 471 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-230ENST00000491028 MAGIXQ9H6Y5 334 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms