RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 AGKQ53H12 422 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMEM41BQ5BJD5 291 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 BEND6Q5SZJ8 279 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 UTF1Q5T230 341 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRAMEF20Q5VT98 475 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 CLEC2AQ6UVW9 174 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PAMR1Q6UXH9 720 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PSTKQ8IV42 348 aaKnown RBP3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZDHHC21Q8IVQ6 265 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 MISPQ8IVT2 679 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 RNF148Q8N7C7 305 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 FADS6Q8N9I5 356 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 BHLHE23Q8NDY6 225 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 FAM71CQ8NEG0 241 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 OR52B4Q8NGK2 314 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 CCT8L2Q96SF2 557 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF607Q96SK3 696 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 NDUFAF3Q9BU61 184 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 FICDQ9BVA6 458 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 DEFB126Q9BYW3 111 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 GPR61Q9BZJ8 451 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 FAM192AQ9GZU8 254 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SIRPDQ9H106 197 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLITRK2Q9H156 845 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 XKR8Q9H6D3 395 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 VAT1LQ9HCJ6 419 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PURGQ9UJV8 347 aaKnown RBP3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 FZR1Q9UM11 496 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 CLEC4AQ9UMR7 237 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 CHMP2BQ9UQN3 213 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 KLHDC2Q9Y2U9 406 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PTPRUQ92729 1446 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 A0A075B6Q4 140 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 SERTM2A0A1B0GWG4 89 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 TNFSF11O14788 317 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 XPO1O14980 1071 aaKnown RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CHADO15335 359 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 SDC3O75056 442 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 FLOT1O75955 427 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 MFN2O95140 757 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 UGT2B4P06133 528 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 IDSP22304 550 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 PTPN6P29350 595 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 EPS15P42566 896 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 HERVK_113P63132 956 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 ERVK-8P63133 956 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CXCL6P80162 114 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 HSF2Q03933 536 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CD47Q08722 323 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 DOC2AQ14183 400 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 FBXO48Q5FWF7 155 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 MEDAGQ5VYS4 303 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CGB2Q6NT52 195 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 MCOLN2Q8IZK6 566 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 DLX4Q92988 240 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 TADA1Q96BN2 335 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 DHTKD1Q96HY7 919 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 MTG1Q9BT17 334 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 ERVK-6Q9BXR3 956 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CRNKL1Q9BZJ0 848 aaKnown RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 PKIBQ9C010 78 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 ROPN1Q9HAT0 212 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 CNOT2Q9NZN8 540 aaKnown RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 DPM3Q9P2X0 92 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF490Q9ULM2 529 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 N6AMT1Q9Y5N5 214 aa3.62□□□□□ -1.83
HMGB1P38-201ENST00000490557 TRBV7-9A0A0J9YWB2 115 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF716A6NP11 495 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PDLIM1O00151 329 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 B4GALT2O60909 372 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 VPS26AO75436 327 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 STK17BO94768 372 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 DUSP14O95147 198 aaKnown RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SERPINA3P01011 423 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 NPPAP01160 153 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 IL1BP01584 269 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ASNSP08243 561 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 HOXB7P09629 217 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ALPIP09923 528 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC35G4P0C7Q5 338 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF735P0CB33 412 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 STAG3L3P0CL85 134 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 CT45A10P0DMU9 189 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 RALAP11233 206 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 DRD5P21918 477 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 FASP25445 335 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRDX6P30041 224 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 RFC2P35250 354 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 XCR1P46094 333 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC6A8P48029 635 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 AIF1P55008 147 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 CARD18P57730 90 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ARHGAP19Q14CB8 494 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRR30Q53SZ7 412 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMEM26Q6ZUK4 368 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRR22Q8IZ63 422 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF321PQ8N8H1 164 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 STKLD1Q8NE28 680 aa3.61□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF397Q8NF99 534 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms