RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SNTA1Q13424 505 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TPBGQ13641 420 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF273Q14593 569 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PTPRCAPQ14761 206 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 NCF4Q15080 339 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SF3A2Q15428 464 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 GRK1Q15835 563 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 AANATQ16613 207 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 DUSP6Q16828 381 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PTCHD3Q3KNS1 767 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 KLHL22Q53GT1 634 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SPIN4Q56A73 249 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 C3orf38Q5JPI3 329 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 C10orf120Q5SQS8 335 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PDZK1Q5T2W1 519 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ARMC12Q5T9G4 340 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PXDC1Q5TGL8 231 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MARC1Q5VT66 337 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 HACD4Q5VWC8 232 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SHEQ5VZ18 495 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 C12orf73Q69YU5 71 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TYW3Q6IPR3 259 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM81Q6P7N7 255 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 FAM131AQ6UXB0 335 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 CERS6Q6ZMG9 384 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF730Q6ZMV8 503 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 Q6ZPB1 254 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 FAM92BQ6ZTR7 304 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 USP45Q70EL2 814 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PRSS42Q7Z5A4 293 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 VTCN1Q7Z7D3 282 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 COMMD7Q86VX2 200 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 AMIGO1Q86WK6 493 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 BBS7Q8IWZ6 715 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PIANPQ8IYJ0 282 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 STK40Q8N2I9 435 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 RYBPQ8N488 228 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 NANOGP1Q8N7R0 232 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 L3MBTL4Q8NA19 623 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SIDT2Q8NBJ9 832 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF485Q8NCK3 441 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OR8J2Q8NGG1 315 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OR52H1Q8NGJ2 320 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OR9Q1Q8NGQ5 310 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OR8K5Q8NH50 307 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 GOT1L1Q8NHS2 421 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 WDR36Q8NI36 951 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM163Q8TC26 289 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 CSGALNACT1Q8TDX6 532 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 EEF1AKMT1Q8WVE0 214 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 APOBEC4Q8WW27 367 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SMG7Q92540 1137 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZNF707Q96C28 371 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OMA1Q96E52 524 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MVB12AQ96EY5 273 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 C11orf24Q96F05 449 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZBED6CLQ96FA7 236 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 HMCESQ96FZ2 354 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 CMTM7Q96FZ5 175 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 CDKN2AIPNLQ96HQ2 116 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM41AQ96HV5 264 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 KLHL15Q96M94 604 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 GUCD1Q96NT3 240 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 PSKH2Q96QS6 385 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 OR2M2Q96R28 347 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MYADMQ96S97 322 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM175Q9BSA9 504 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 DOHHQ9BU89 302 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZSCAN5AQ9BUG6 496 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MND1Q9BWT6 205 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MRPL9Q9BYD2 267 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SLC7A5P2Q9GIP4 190 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 POLR1EQ9GZS1 481 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SHARPINQ9H0F6 387 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 GHITMQ9H3K2 345 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 RANBP3Q9H6Z4 567 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ELAC1Q9H777 363 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ERVMER34-1Q9H9K5 563 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 RDH14Q9HBH5 336 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ABCB9Q9NP78 766 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 NT5MQ9NPB1 228 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 WASH6PQ9NQA3 447 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ABCC13Q9NSE7 274 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TMEM184CQ9NVA4 438 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MRPS18AQ9NVS2 196 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 RLIMQ9NVW2 624 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 FBXO34Q9NWN3 711 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MCUBQ9NWR8 336 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TXNL4BQ9NX01 149 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 LYARQ9NX58 379 aaKnown RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 IMPAD1Q9NX62 359 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ELOVL2Q9NXB9 296 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 MS4A12Q9NXJ0 267 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 SLCO1C1Q9NYB5 712 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 TAS2R16Q9NYV7 291 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 CFAP97Q9P2B7 532 aa3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 UXTQ9UBK9 157 aaPredicted RBP3.22□□□□□ -1.89
CRNKL1-203ENST00000490258 ZMAT5Q9UDW3 170 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms