RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TUBBP07437 444 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ACP2P11117 423 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ME2P23368 584 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 RPS4XP62701 263 aaKnown RBP14.15□□□□□ -0.14
PLOD3-216ENST00000489927 CLEC12BQ2HXU8 276 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ZNF385BQ569K4 471 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ZYG11AQ6WRX3 759 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 FRMD7Q6ZUT3 714 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 SZRD1Q7Z422 152 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 LILRA2Q8N149 483 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 NUP43Q8NFH3 380 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 CEP70Q8NHQ1 597 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 MZB1Q8WU39 189 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ROBO4Q8WZ75 1007 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 OSTF1Q92882 214 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 CCDC126Q96EE4 140 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 HHATLQ9HCP6 504 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 PTGDR2Q9Y5Y4 395 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 ATRQ13535 2644 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 USF3Q68DE3 2245 aa14.15□□□□□ -0.14
PLOD3-216ENST00000489927 RNF223E7ERA6 249 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 OVOL3O00110 214 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 RIPK2O43353 540 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 GCM2O75603 506 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 NTN1O95631 604 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 SOD3P08294 240 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 MYL2P10916 166 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 SHC1P29353 583 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 SFTPDP35247 375 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 CARD18P57730 90 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 VEZF1Q14119 521 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 TSC22D1Q15714 1073 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 DUSP5Q16690 384 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 PDSS1Q5T2R2 415 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 GTF2IRD2BQ6EKJ0 949 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 ADAM5Q6NVV9 412 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 GTF2IRD2Q86UP8 949 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 GABRG1Q8N1C3 465 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 STEAP2Q8NFT2 490 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 OR6Y1Q8NGX8 325 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 RNF128Q8TEB7 428 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 ABHD3Q8WU67 409 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 OTUB1Q96FW1 271 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 C16orf58Q96GQ5 468 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF764Q96H86 408 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 METTL2AQ96IZ6 378 aaKnown RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 KLHL15Q96M94 604 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 C16orf45Q96MC5 204 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 MS4A4EQ96PG1 132 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 TACO1Q9BSH4 297 aaKnown RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 REPIN1Q9BWE0 567 aaKnown RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 UBQLN4Q9NRR5 601 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 NTMQ9P121 344 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 PSMC3IPQ9P2W1 217 aaPredicted RBP14.14□□□□□ -0.15
PLOD3-216ENST00000489927 TBK1Q9UHD2 729 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 DCDC2Q9UHG0 476 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 RNF115Q9Y4L5 304 aa14.14□□□□□ -0.15
PLOD3-216ENST00000489927 NPIPB8E9PQR5 432 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 H3BQF6 201 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 SCDO00767 359 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 CLOCKO15516 846 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 AKAP10O43572 662 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 LINGO3P0C6S8 592 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 UROSP10746 265 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 HPGDP15428 266 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 PRPH2P23942 346 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 PRIM2P49643 509 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 MANFP55145 182 aaKnown RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 DMTNQ08495 405 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 CD226Q15762 336 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 ZNF239Q16600 458 aaKnown RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 TMEM201Q5SNT2 666 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 NCMAPQ5T1S8 102 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 CCNJQ5T5M9 372 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 CLEC6AQ6EIG7 209 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 TFAP2EQ6VUC0 442 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 TRMT10CQ7L0Y3 403 aaKnown RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 NUFIP2Q7Z417 695 aaKnown RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 TRABD2AQ86V40 505 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 MISPQ8IVT2 679 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 B4GALNT2Q8NHY0 566 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 ZFP28Q8NHY6 868 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 NEUROG1Q92886 237 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 FBXW5Q969U6 566 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 PPCDCQ96CD2 204 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 ZBED6CLQ96FA7 236 aaPredicted RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 HDHD5Q9BXW7 423 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 SRXN1Q9BYN0 137 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 IQCGQ9H095 443 aaKnown RBP14.13□□□□□ -0.15
PLOD3-216ENST00000489927 REEP4Q9H6H4 257 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 C1orf109Q9NX04 203 aa14.13□□□□□ -0.15
PLOD3-216ENST00000489927 A0A1W2PPM1 405 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 A0A1W2PQD3 144 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 EFNA2O43921 213 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 TBX19O60806 448 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 PROCP04070 461 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 DANCRP0C864 163 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 PABPC4LP0CB38 370 aaKnown RBP14.12□□□□□ -0.15
PLOD3-216ENST00000489927 SDC1P18827 310 aa14.12□□□□□ -0.15
PLOD3-216ENST00000489927 CDKN1AP38936 164 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms