RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 LINC01555Q8NAE3 123 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 FAM71CQ8NEG0 241 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 ANKRD20A12PQ8NF67 263 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 C7orf33Q8WU49 177 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 SAMD8Q96LT4 415 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 RNF126Q9BV68 326 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 NFKBIZQ9BYH8 718 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 CHIAQ9BZP6 476 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 SOHLH2Q9NX45 425 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 FOXJ3Q9UPW0 622 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 KNSTRNQ9Y448 316 aa3.28□□□□□ -1.88
CCDC39-206ENST00000489868 GTF3C1Q12789 2109 aa3.28□□□□□ -1.89
CCDC39-206ENST00000489868 NACAE9PAV3 2078 aa3.28□□□□□ -1.89
CCDC39-206ENST00000489868 CCDC7Q96M83 1385 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 IGHV7-81A0A0B4J1V7 117 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 LOC100131303A0A0U1RQF7 123 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 FAM74A7A6NL05 159 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 USP27XA6NNY8 438 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 CCDC192P0DO97 292 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 GNPDA1P46926 289 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 TLE4Q04727 773 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ADPRMQ3LIE5 342 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 SULT1C3Q6IMI6 304 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 SKA3Q8IX90 412 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ENTHD1Q8IYW4 607 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 RNF175Q8N4F7 328 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ALLCQ8N6M5 410 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 STKLD1Q8NE28 680 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 FBXO30Q8TB52 745 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 FCGR1BQ92637 280 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 MRPL38Q96DV4 380 aaKnown RBP3.27□□□□□ -1.89
CCDC39-206ENST00000489868 TMEM237Q96Q45 408 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 SMIM14Q96QK8 99 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 TESK2Q96S53 571 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ACTR8Q9H981 624 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ZNF331Q9NQX6 463 aaPredicted RBP3.27□□□□□ -1.89
CCDC39-206ENST00000489868 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.27□□□□□ -1.89
CCDC39-206ENST00000489868 LCMT1Q9UIC8 334 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 ABCC9O60706 1549 aa3.27□□□□□ -1.89
CCDC39-206ENST00000489868 SMIM28A0A1B0GU29 152 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 K7N7A8 449 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 TRAF3IP2O43734 574 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-206ENST00000489868 STX11O75558 287 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 SUPT7LO94864 414 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 PSG2P11465 335 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 AQP1P29972 269 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 ADSSP30520 456 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 GCKP35557 465 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 KIR2DS2P43631 304 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 RABIFP47224 123 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 OR8G2PQ6IF36 304 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 TIFABQ6ZNK6 161 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 KDM8Q8N371 416 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 Q8N9L7 120 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 ZSCAN4Q8NAM6 433 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-206ENST00000489868 DCUN1D4Q92564 292 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 MCHR1Q99705 422 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 LPAR2Q9HBW0 351 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 MYOZ2Q9NPC6 264 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 NANSQ9NR45 359 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 UBQLN1Q9UMX0 589 aaKnown RBP3.26□□□□□ -1.89
CCDC39-206ENST00000489868 PRG3Q9Y2Y8 225 aaPredicted RBP3.26□□□□□ -1.89
CCDC39-206ENST00000489868 MAB21L2Q9Y586 359 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 LTBP1Q14766 1721 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 CUX2O14529 1486 aa3.26□□□□□ -1.89
CCDC39-206ENST00000489868 ARID1AO14497 2285 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 CA3P07451 260 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 H2AFXP16104 143 aaPredicted RBP3.25□□□□□ -1.89
CCDC39-206ENST00000489868 GABRR1P24046 479 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 ATXN3P54252 364 aaPredicted RBP3.25□□□□□ -1.89
CCDC39-206ENST00000489868 SPP2Q13103 211 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 TIGITQ495A1 244 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 EOGTQ5NDL2 527 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 BCORP1Q8N888 145 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 DCAF4L2Q8NA75 395 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 TAF4BQ92750 862 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 VSTM2LQ96N03 204 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 EBF4Q9BQW3 602 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 FEM1AQ9BSK4 669 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 SPXQ9BT56 116 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 NINJ2Q9NZG7 142 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 CD274Q9NZQ7 290 aa3.25□□□□□ -1.89
CCDC39-206ENST00000489868 A0A0J9YXY3 114 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 A0A0U1RQV5 110 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 TRIM49D1C9J1S8 452 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 ABCD4O14678 606 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 SSX5O60225 188 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 PTBP3O95758 552 aaKnown RBP3.24□□□□□ -1.89
CCDC39-206ENST00000489868 RRASP10301 218 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 UQCRBP14927 111 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 BTDP43251 543 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 BDKRB1P46663 353 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 ASPHD2Q6ICH7 369 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 ZNF100Q8IYN0 542 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 CERS5Q8N5B7 392 aa3.24□□□□□ -1.89
CCDC39-206ENST00000489868 CNIH3Q8TBE1 160 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms