RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 NPIPA5A0A0B4J1W7 369 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 A0A0G2JND7 137 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 NPIPA7E9PJI5 369 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 GTPBP1O00178 669 aaKnown RBP15.71■□□□□ 0.11
MDC1-206ENST00000489540 HMGN4O00479 90 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 HCRTR2O43614 444 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 FCMRO60667 390 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 NPIPA8P0DM63 369 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 TROVE2P10155 538 aaKnown RBP eCLIP15.71■□□□□ 0.11
MDC1-206ENST00000489540 PEPDP12955 493 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 STARP49675 285 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 LHX2P50458 406 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 GPR68Q15743 365 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 CD226Q15762 336 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 ZNF141Q15928 474 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 DCST1Q5T197 706 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 RIPPLY2Q5TAB7 128 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 RAET1LQ5VY80 246 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 LACC1Q8IV20 430 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 SPDL1Q96EA4 605 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 SAP130Q9H0E3 1048 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 CCDC134Q9H6E4 229 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 CALHM2Q9HA72 323 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 CHST11Q9NPF2 352 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 MKLN1Q9UL63 735 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 WDR45Q9Y484 360 aa15.71■□□□□ 0.11
MDC1-206ENST00000489540 ASH1LQ9NR48 2969 aaKnown RBP15.71■□□□□ 0.11
MDC1-206ENST00000489540 ICE1Q9Y2F5 2266 aa15.71■□□□□ 0.1
MDC1-206ENST00000489540 CD8B2A6NJW9 211 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 PRSS44E7EML9 344 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 GMFGO60234 142 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
MDC1-206ENST00000489540 TCEA1P23193 301 aaKnown RBP15.7■□□□□ 0.1
MDC1-206ENST00000489540 HTR1EP28566 365 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 TIMP3P35625 211 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 ZNF41P51814 821 aaPredicted RBP15.7■□□□□ 0.1
MDC1-206ENST00000489540 HPCAP84074 193 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 SRYQ05066 204 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 AGKQ53H12 422 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
MDC1-206ENST00000489540 NSUN5P2Q63ZY6 315 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 ARSKQ6UWY0 536 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 ZNF614Q8N883 585 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 LILRB4Q8NHJ6 448 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 ZBTB8AQ96BR9 441 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 SH3YL1Q96HL8 342 aaPredicted RBP15.7■□□□□ 0.1
MDC1-206ENST00000489540 TRNT1Q96Q11 434 aaKnown RBP15.7■□□□□ 0.1
MDC1-206ENST00000489540 TPT1P8Q9HAU6 139 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 SLC6A13Q9NSD5 602 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 STOML1Q9UBI4 398 aa15.7■□□□□ 0.1
MDC1-206ENST00000489540 OR2M5A3KFT3 312 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 SERINC4A6NH21 518 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 HSPB2A8KAH6 182 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 H0Y3Z8 333 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 NR5A2O00482 541 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 EIF4E2O60573 245 aaKnown RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 C1QCP02747 245 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 ZNF708P17019 499 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 ADH7P40394 386 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 P2RX1P51575 399 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 SUMO3P55854 103 aaPredicted RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 EEFSECP57772 596 aaKnown RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 GUCY1A3Q02108 690 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 HSPB2Q16082 182 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 TMEM44Q2T9K0 475 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 GPAT3Q53EU6 434 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 PDZK1Q5T2W1 519 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 SP5Q6BEB4 398 aaPredicted RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 TYW3Q6IPR3 259 aaKnown RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 SLC2A7Q6PXP3 512 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 DNAJC14Q6Y2X3 702 aaPredicted RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 PMM1Q92871 262 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 TRIB1Q96RU8 372 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 SLC52A3Q9NQ40 469 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 MRGBPQ9NV56 204 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 MED17Q9NVC6 651 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 FGFR1OP2Q9NVK5 253 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 THUMPD1Q9NXG2 353 aaKnown RBP15.69■□□□□ 0.1
MDC1-206ENST00000489540 VDAC3Q9Y277 283 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 ZNF337Q9Y3M9 751 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 PCDHB14Q9Y5E9 798 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 AP4B1Q9Y6B7 739 aa15.69■□□□□ 0.1
MDC1-206ENST00000489540 A0A096LPI6 279 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 A0A0G2JNJ9 132 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 A0A1W2PP18 115 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 C7orf72A4D263 438 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 KIAA0513O60268 411 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 UGT2B17O75795 530 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 NR2F1P10589 423 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 ZNF17P17021 662 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 POU3F2P20265 443 aaPredicted RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 MDH1P40925 334 aaKnown RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 EIF1P41567 113 aaKnown RBP15.68■□□□□ 0.1
MDC1-206ENST00000489540 CRATP43155 626 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CLDN18P56856 261 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 ZNF117Q03924 483 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 COX20Q5RI15 118 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 LRRC74BQ6ZQY2 392 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 SEM1Q6ZVN7 128 aa15.68■□□□□ 0.1
MDC1-206ENST00000489540 CHMP1BQ7LBR1 199 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms