RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ATL1Q8WXF7 558 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 HSD17B8Q92506 261 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 LPGAT1Q92604 370 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 EXT2Q93063 718 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 RHBDF1Q96CC6 855 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 PHF21BQ96EK2 531 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 GNRHR2Q96P88 292 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CCDC106Q9BWC9 280 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 ERVK-6Q9BXR3 956 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 DERL2Q9GZP9 239 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 C1orf21Q9H246 121 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 RNF122Q9H9V4 155 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 FANCFQ9NPI8 374 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 NECTIN3Q9NQS3 549 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 FKBPLQ9UIM3 349 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 DYNC1H1Q14204 4646 aaKnown RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 E9PBE3 544 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 J3QLI3 93 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 PRMT5O14744 637 aaPredicted RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 GSC2O15499 205 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 ZBTB14O43829 449 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 KERAO60938 352 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 SUPT7LO94864 414 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 LRATO95237 230 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CHEK2O96017 543 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CHRNGP07510 517 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 GSTM1P09488 218 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 SBK3P0C264 359 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CD1DP15813 335 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CHRM3P20309 590 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 LHX2P50458 406 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CLDN18P56856 261 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 STX1BP61266 288 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 GSTM4Q03013 218 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 PTPRCAPQ14761 206 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 TOMM20Q15388 145 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 MAPRE2Q15555 327 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 TRMT5Q32P41 509 aaKnown RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 GPR33Q49SQ1 333 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 NKAPLQ5M9Q1 402 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 TCHHL1Q5QJ38 904 aaPredicted RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 FIGNL1Q6PIW4 674 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 C16orf89Q6UX73 402 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 HSDL2Q6YN16 418 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 FRMD7Q6ZUT3 714 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 FRA10AC1Q70Z53 315 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 SNX20Q7Z614 316 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 ISCA2Q86U28 154 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 YRDCQ86U90 279 aaKnown RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 FAM13CQ8NE31 585 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 Q8NFD4 153 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CEP70Q8NHQ1 597 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 HMGCLL1Q8TB92 370 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 ADAMTS15Q8TE58 950 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 FIG4Q92562 907 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 KCNJ9Q92806 393 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 SPACA9Q96E40 222 aaPredicted RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 L3HYPDHQ96EM0 354 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 SERPINI1Q99574 410 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 TRIM54Q9BYV2 358 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 NUF2Q9BZD4 464 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 DCLRE1BQ9H816 532 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 TAS2R1Q9NYW7 299 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 NOP53Q9NZM5 478 aaKnown RBP6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 BCAP29Q9UHQ4 241 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 CRLS1Q9UJA2 301 aa6.54□□□□□ -1.36
EXOSC3-206ENST00000489414 A0A0G2JMP0 313 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 A0A0X1KG70 313 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ANKRD33BA6NCL7 494 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF860A6NHJ4 632 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 AGAP14A8MT82 685 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF195O14628 629 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 SLITRK5O94991 958 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZFPL1O95159 310 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 WISP3O95389 354 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 COX4I1P13073 169 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF708P17019 499 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 RPS3P23396 243 aaKnown RBP eCLIP6.53□□□□□ -1.369e-10■■■■□ 25.3
EXOSC3-206ENST00000489414 GCKP35557 465 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PGGT1BP53609 377 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 RELAQ04206 551 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 KLF10Q13118 480 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CDK5R2Q13319 367 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CUL3Q13618 768 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 NFYCQ13952 458 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 CYLC2Q14093 348 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 TSC22D1Q15714 1073 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PFKFB4Q16877 469 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 SWI5Q1ZZU3 235 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 TTLL9Q3SXZ7 439 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 SLC9B1Q4ZJI4 515 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF678Q5SXM1 525 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF425Q6IV72 752 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF549Q6P9A3 640 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 PAQR3Q6TCH7 311 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 MAVSQ7Z434 540 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 NET1Q7Z628 596 aaPredicted RBP6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 ADAMTSL2Q86TH1 951 aa6.53□□□□□ -1.36
EXOSC3-206ENST00000489414 TREML1Q86YW5 311 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms