RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 GPR83Q9NYM4 423 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TESQ9UGI8 421 aaKnown RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 OSGIN1Q9UJX0 560 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 DIMT1Q9UNQ2 313 aaKnown RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 CFL2Q9Y281 166 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF443Q9Y2A4 671 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM5Q9Y2B1 443 aa7.87□□□□□ -1.15
VTI1A-207ENST00000489357 UNC13CQ8NB66 2214 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 MED19A0JLT2 244 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ANKRD33BA6NCL7 494 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SAGE2PA6NJ88 616 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 M0R3H8 397 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TAF4O00268 1085 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 EREGO14944 169 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 YKT6O15498 198 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 P2RX6O15547 441 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 KIAA0513O60268 411 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 PRKRAO75569 313 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 EPPINO95925 133 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TP53P04637 393 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 HMGN1P05114 100 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CFIP05156 583 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SCG5P05408 212 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 STSP08842 583 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 GIMD1P0DJR0 217 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 NID1P14543 1247 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 POU2F1P14859 743 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 MMP11P24347 488 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CD40LGP29965 261 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 MAP2K4P45985 399 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 STT3AP46977 705 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CAPZA2P47755 286 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 PSMD4P55036 377 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 RGS8P57771 180 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 EEF1A1P68104 462 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 IGLV3-21P80748 117 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CHRNEQ04844 493 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 DUSP2Q05923 314 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 RAB40BQ12829 278 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TMED1Q13445 227 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 PRICKLE4Q2TBC4 344 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 PRTGQ2VWP7 1150 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CYP27C1Q4G0S4 372 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 C3orf38Q5JPI3 329 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TCTE1Q5JU00 501 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ARMC4Q5T2S8 1044 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TYW3Q6IPR3 259 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF730Q6ZMV8 503 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 FRRS1Q6ZNA5 592 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 C20orf204Q6ZNR8 217 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 MBOAT2Q6ZWT7 520 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ZER1Q7Z7L7 766 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ADCK1Q86TW2 530 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SLCO6A1Q86UG4 719 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 GRAMD2AQ8IUY3 354 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 FAM20CQ8IXL6 584 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CMIPQ8IY22 773 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF595Q8IYB9 648 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CA13Q8N1Q1 262 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ARHGEF39Q8N4T4 335 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 C19orf47Q8N9M1 422 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SLC16A11Q8NCK7 471 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 OR6C4Q8NGE1 309 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 OR9Q1Q8NGQ5 310 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SAP25Q8TEE9 199 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 UCN3Q969E3 161 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 UBE2FQ969M7 185 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SLC35A4Q96G79 324 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 C16orf58Q96GQ5 468 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SH3YL1Q96HL8 342 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 PLEKHA8Q96JA3 519 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 HS6ST2Q96MM7 605 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ZNF285Q96NJ3 590 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SDF2Q99470 211 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 ELF4Q99607 663 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 MACROD1Q9BQ69 325 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 JAM3Q9BX67 310 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 RSPO3Q9BXY4 272 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SLIRPQ9GZT3 109 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 NXF2Q9GZY0 626 aaKnown RBP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SYNDIG1Q9H7V2 258 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 SYNPO2LQ9H987 977 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 AKIP1Q9NQ31 210 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM9BQ9NQ34 198 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 IL20Q9NYY1 176 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 FRRS1LQ9P0K9 344 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 RHCGQ9UBD6 479 aa7.86□□□□□ -1.15
VTI1A-207ENST00000489357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.86□□□□□ -1.15
VTI1A-207ENST00000489357 CCDC88CQ9P219 2028 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 PTPRBP23467 1997 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 A0A087WUU8 490 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 PNMA8CA0A1B0GUJ8 204 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 TMEM129A0AVI4 362 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 ISPDA4D126 451 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 TRAPPC13A5PLN9 417 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 C4orf47A7E2U8 309 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 H0YIG0 161 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 M0R082 166 aa7.85□□□□□ -1.15
VTI1A-207ENST00000489357 CLDN4O14493 209 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms