RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 NPIPA8P0DM63 369 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 ATP5A1P25705 553 aaKnown RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 GDI1P31150 447 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 CDH5P33151 784 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 CEBPDP49716 269 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 RPL8P62917 257 aaKnown RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 BEX3Q00994 111 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 FGL1Q08830 312 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 IL18R1Q13478 541 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 CYLC2Q14093 348 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 DPYSL3Q14195 570 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 MXD4Q14582 209 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 SLC5A12Q1EHB4 618 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 CFAP221Q4G0U5 840 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 ZNF506Q5JVG8 444 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 FAM182AQ5T1J6 154 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 ZNF57Q68EA5 555 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 Q6ZPB1 254 aaPredicted RBP3.42□□□□□ -1.86
XRN1-213ENST00000489241 IFNEQ86WN2 208 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 LRRC49Q8IUZ0 686 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 OR56B2PQ8NGI1 322 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 OR4Q3Q8NH05 313 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 ZNF671Q8TAW3 534 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 NPY6RQ99463 290 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 VGLL1Q99990 258 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 DUSP16Q9BY84 665 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 UBXN6Q9BZV1 441 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 IKZF5Q9H5V7 419 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 PANK3Q9H999 370 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 NMRK1Q9NWW6 199 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 SIGLEC8Q9NYZ4 499 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 CTNNA3Q9UI47 895 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 ZNF221Q9UK13 617 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 NPIPA1Q9UND3 350 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 NTNG1Q9Y2I2 539 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 FER1L5A0AVI2 2057 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 FRMPD4Q14CM0 1322 aa3.42□□□□□ -1.86
XRN1-213ENST00000489241 A0A1B0GTH9 108 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 OR6C65A6NJZ3 312 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MSH4O15457 936 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 LCMT2O60294 686 aaKnown RBP3.41□□□□□ -1.86
XRN1-213ENST00000489241 FCMRO60667 390 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MELTFP08582 738 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 H2BFMP0C1H6 154 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 PNMTP11086 282 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 UMPSP11172 480 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MMP11P24347 488 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 GNPDA1P46926 289 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 OR1D4P47884 311 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 P2RY1P47900 373 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 CASP4P49662 377 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 AP3M2P53677 418 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 ACTR3P61158 418 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 NCBP1Q09161 790 aaKnown RBP3.41□□□□□ -1.86
XRN1-213ENST00000489241 COX10Q12887 443 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 PEX6Q13608 980 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MESDQ14696 234 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 GANABQ14697 944 aaKnown RBP3.41□□□□□ -1.86
XRN1-213ENST00000489241 ABRAXAS2Q15018 415 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 CYP51A1Q16850 503 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 CNPY1Q3B7I2 92 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 TIGITQ495A1 244 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 PHYHD1Q5SRE7 291 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 LGSNQ5TDP6 509 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 TPGS2Q68CL5 300 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 NLRP9Q7RTR0 991 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 TAS2R42Q7RTR8 314 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 SLC22A9Q8IVM8 553 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 BADQ92934 168 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 CCNL2Q96S94 520 aaPredicted RBP3.41□□□□□ -1.86
XRN1-213ENST00000489241 EXOSC3Q9NQT5 275 aaKnown RBP3.41□□□□□ -1.86
XRN1-213ENST00000489241 CDH9Q9ULB4 789 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MEMO1Q9Y316 297 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 MAD1L1Q9Y6D9 718 aa3.41□□□□□ -1.86
XRN1-213ENST00000489241 HELTA6NFD8 242 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 G3V4G9 280 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 H0Y8G0 127 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 ECI2O75521 394 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 RENP00797 406 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 SERPINA3P01011 423 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 ALPIP09923 528 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 IDSP22304 550 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 USP6P35125 1406 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 ACVR1BP36896 505 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 MS4A2Q01362 244 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 PAX8Q06710 450 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 RIPPLY1Q0D2K3 151 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 FCHO2Q0JRZ9 810 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 ZNF154Q13106 437 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 C1orf61Q13536 156 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 LAGE3Q14657 143 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 SNAI3Q3KNW1 292 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 WSCD1Q658N2 575 aa3.4□□□□□ -1.87
XRN1-213ENST00000489241 LEMD1Q68G75 181 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms