RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FIG4Q92562 907 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 SH3YL1Q96HL8 342 aaPredicted RBP22.53■■□□□ 1.2
HMGN1-217ENST00000489072 THAP1Q9NVV9 213 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 CRIM1Q9NZV1 1036 aa22.53■■□□□ 1.2
HMGN1-217ENST00000489072 TEP1Q99973 2627 aaKnown RBP22.53■■□□□ 1.2
HMGN1-217ENST00000489072 HPGDP15428 266 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 KIR2DL3P43628 341 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 RNF144AP50876 292 aaPredicted RBP22.52■■□□□ 1.2
HMGN1-217ENST00000489072 OGFOD2Q6N063 350 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 C6orf120Q7Z4R8 191 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 ANKRD46Q86W74 232 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 SMPDL3BQ92485 455 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 TESCQ96BS2 214 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 LRRC46Q96FV0 321 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 HHATLQ9HCP6 504 aa22.52■■□□□ 1.2
HMGN1-217ENST00000489072 MARCOQ9UEW3 520 aaPredicted RBP22.52■■□□□ 1.2
HMGN1-217ENST00000489072 FOXD3Q9UJU5 478 aaPredicted RBP22.52■■□□□ 1.2
HMGN1-217ENST00000489072 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 SLC22A20A6NK97 555 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 OIP5O43482 229 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 TNFSF13O75888 250 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 ATP6V1C1P21283 382 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 SPANXN4Q5MJ08 99 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.51■■□□□ 1.19
HMGN1-217ENST00000489072 CHMP1BQ7LBR1 199 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 GGNQ86UU5 652 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 MISPQ8IVT2 679 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 OR4A15Q8NGL6 344 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 ACTRT2Q8TDY3 377 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF845Q96IR2 970 aaPredicted RBP22.51■■□□□ 1.19
HMGN1-217ENST00000489072 TEX37Q96LM6 180 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 PINK1Q9BXM7 581 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 MED17Q9NVC6 651 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 AP4B1Q9Y6B7 739 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 ABCA4P78363 2273 aa22.51■■□□□ 1.19
HMGN1-217ENST00000489072 HEATR5AQ86XA9 2040 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 A0A087WZY1 265 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 RNF103-CHMP3A0A140T963 221 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 A0A1W2PNV4 684 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 NPIPB9F8W1W9 429 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 TNFRSF21O75509 655 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF17P17021 662 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 PSMA4P25789 261 aaKnown RBP22.5■■□□□ 1.19
HMGN1-217ENST00000489072 NME5P56597 212 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 EEFSECP57772 596 aaKnown RBP22.5■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF117Q03924 483 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 PLPPR5Q32ZL2 321 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 KLHL26Q53HC5 615 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 BHLHB9Q6PI77 547 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 P4HA3Q7Z4N8 544 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 TMEM200AQ86VY9 491 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 WDR75Q8IWA0 830 aaKnown RBP22.5■■□□□ 1.19
HMGN1-217ENST00000489072 GTPBP8Q8N3Z3 284 aaPredicted RBP22.5■■□□□ 1.19
HMGN1-217ENST00000489072 B4GALNT2Q8NHY0 566 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 SLC35G5Q96KT7 338 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 ACBD3Q9H3P7 528 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 WDR55Q9H6Y2 383 aaPredicted RBP22.5■■□□□ 1.19
HMGN1-217ENST00000489072 AIG1Q9NVV5 245 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 NKIRAS1Q9NYS0 192 aa22.5■■□□□ 1.19
HMGN1-217ENST00000489072 GOLGA8QA0A0J9YX86 632 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 PRSS51A0A1B0GVH4 220 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 GOLGA8OA6NCC3 632 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 GOLGA8NF8WBI6 632 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 HDAC3O15379 428 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 SOX30O94993 753 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 CPSF4O95639 269 aaKnown RBP22.49■■□□□ 1.19
HMGN1-217ENST00000489072 KITP10721 976 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 MATN1P21941 496 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 EPHA3P29320 983 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 PEX19P40855 299 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 CLNS1AP54105 237 aaKnown RBP22.49■■□□□ 1.19
HMGN1-217ENST00000489072 UFM1P61960 85 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 OCRLQ01968 901 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 CASP8Q14790 479 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 FLYWCH1Q4VC44 716 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 LUZP2Q86TE4 346 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 CDH24Q86UP0 819 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 METTL25Q8N6Q8 603 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 RAB3IL1Q8TBN0 382 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 POC1BQ8TC44 478 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 PHOSPHO1Q8TCT1 267 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 SDF2Q99470 211 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 HOXD1Q9GZZ0 328 aa22.49■■□□□ 1.19
HMGN1-217ENST00000489072 C7orf72A4D263 438 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 IL12AP29459 219 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF41P51814 821 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ATP12AP54707 1039 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 CASP9P55211 416 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 FAM174BQ3ZCQ3 159 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ANXA8L1Q5VT79 327 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ATG16L1Q676U5 607 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 CBLN3Q6UW01 205 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 OLIG3Q7RTU3 272 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 MTERF4Q7Z6M4 381 aaKnown RBP22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ZNF527Q8NB42 609 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 CHDHQ8NE62 594 aaPredicted RBP22.48■■□□□ 1.19
HMGN1-217ENST00000489072 FNDC9Q8TBE3 224 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ARL8AQ96BM9 186 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 ZBTB8AQ96BR9 441 aa22.48■■□□□ 1.19
HMGN1-217ENST00000489072 RNF145Q96MT1 663 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms