RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SRRM4A7MD48 611 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 H0YIG0 161 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 ARPC1BO15143 372 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 CALCAP01258 141 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TDGF1P13385 188 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 NDST1P52848 882 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 KIAA1024LP59773 190 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 LYZP61626 148 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 ARF5P84085 180 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 SRSF5Q13243 272 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TSTA3Q13630 321 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 BTG3Q14201 252 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 KRT31Q15323 416 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 PPP1R3AQ16821 1122 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 C17orf58Q2M2W7 97 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 WSCD2Q2TBF2 565 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 UNC50Q53HI1 259 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 HIST2H2AA3Q6FI13 130 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 MFSD7Q6UXD7 560 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 APOOLQ6UXV4 268 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 STOX1Q6ZVD7 989 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 IQCA1Q86XH1 822 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 LINC00518Q8N0U6 118 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 FBXW8Q8N3Y1 598 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 ZNRF1Q8ND25 227 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 MRAPQ8TCY5 172 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TFB1MQ8WVM0 346 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TCEAL3Q969E4 200 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 PNPLA2Q96AD5 504 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 PPP1R16AQ96I34 528 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 CYYR1Q96J86 154 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 B3GALT6Q96L58 329 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 SIGLEC12Q96PQ1 595 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 MCCC1Q96RQ3 725 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 RNF41Q9H4P4 317 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 RPAP3Q9H6T3 665 aaPredicted RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 DCTPP1Q9H773 170 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TMEM9BQ9NQ34 198 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TIGARQ9NQ88 270 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 ZCCHC3Q9NUD5 404 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 TECRQ9NZ01 308 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 SNX5Q9Y5X3 404 aa3.26□□□□□ -1.89
ITGB1-214ENST00000488427 SPENQ96T58 3664 aaKnown RBP3.26□□□□□ -1.89
ITGB1-214ENST00000488427 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 MYLKQ15746 1914 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CEP192Q8TEP8 1941 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 MTCL1Q9Y4B5 1905 aaKnown RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 IGHV3OR16-12A0A075B7B8 117 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 TRABD2BA6NFA1 517 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 SLC28A1O00337 649 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 SLC7A4O43246 635 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 RTN2O75298 545 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 TXNDC12O95881 172 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CHRNGP07510 517 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 H2AFZP0C0S5 128 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 HIST1H2AGP0C0S8 130 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 AZU1P20160 251 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 ACADSBP45954 432 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 NSFP46459 744 aaKnown RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 RPS9P46781 194 aaKnown RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 ARHGDIAP52565 204 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 AARDQ4LEZ3 155 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CAVIN4Q5BKX8 364 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 PRAMEF8Q5VWM4 474 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 TATDN1Q6P1N9 297 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 IYDQ6PHW0 289 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CCBE1Q6UXH8 406 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 C2orf66Q6UXQ4 117 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 ARMCX2Q7L311 632 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 FAM133AQ8N9E0 248 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 COLGALT1Q8NBJ5 622 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CHDHQ8NE62 594 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 KLHL30-AS1Q8NEE0 82 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 OR4F5Q8NH21 305 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 OR4L1Q8NH43 312 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 HIST1H2ACQ93077 130 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 SLCO4A1Q96BD0 722 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CXorf58Q96LI9 332 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 TTYH2Q9BSA4 534 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 MTG1Q9BT17 334 aaPredicted RBP3.25□□□□□ -1.89
ITGB1-214ENST00000488427 FUNDC2Q9BWH2 189 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 ACPTQ9BZG2 426 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 DCLRE1BQ9H816 532 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 PNPLA3Q9NST1 481 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 TAS2R16Q9NYV7 291 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 ARMCX1Q9P291 453 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 CSMD1Q96PZ7 3565 aa3.25□□□□□ -1.89
ITGB1-214ENST00000488427 BAZ2BQ9UIF8 2168 aaKnown RBP3.24□□□□□ -1.89
ITGB1-214ENST00000488427 APCP25054 2843 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 STBD1O95210 358 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 LY6G6DO95868 133 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 NUDT17P0C025 328 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 CCDC159P0C7I6 412 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 KLK2P20151 261 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 FCARP24071 287 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 ACP1P24666 158 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 COPB2P35606 906 aa3.24□□□□□ -1.89
ITGB1-214ENST00000488427 MTIF2P46199 727 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms