RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 AGXTP21549 392 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 TSPAN7P41732 249 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PPICP45877 212 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PSMD4P55036 377 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 DCAF7P61962 342 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 KEAP1Q14145 624 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MAPK14Q16539 360 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.74□□□□□ -0.53
NELFE-209ENST00000488426 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PRSS58Q8IYP2 241 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CLIP4Q8N3C7 705 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MORN4Q8NDC4 146 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 ZNF721Q8TF20 911 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 LRFN5Q96NI6 719 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MUS81Q96NY9 551 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 FUZQ9BT04 418 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 DPH1Q9BZG8 443 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 GRIP2Q9C0E4 1043 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 POLR2J2Q9GZM3 115 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 OR8D2Q9GZM6 311 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 POLR2J3Q9H1A7 115 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 ANKRD19PQ9H560 264 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 COPS7AQ9UBW8 275 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CBLCQ9ULV8 474 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MYRFQ9Y2G1 1151 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 B3GALT1Q9Y5Z6 326 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 TRBV4-1A0A0J9YWV2 114 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CENPVL1A0A0U1RR11 272 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 OR6C76A6NM76 312 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 EIF4E1BA6NMX2 242 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 A8MUA0 341 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 MEN1O00255 615 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 BCKDKO14874 412 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CLIC3O95833 236 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 HEXBP07686 556 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CCNYL3P0C7X3 344 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CBLP22681 906 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 IL1RL1Q01638 556 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 PIN1Q13526 163 aaPredicted RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 ZNF770Q6IQ21 691 aaPredicted RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 TTC33Q6PID6 262 aaPredicted RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 THAP5Q7Z6K1 395 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 VASH2Q86V25 355 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CTRCQ99895 268 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
NELFE-209ENST00000488426 RIBC2Q9H4K1 309 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 KCNE5Q9UJ90 142 aa11.74□□□□□ -0.53
NELFE-209ENST00000488426 CDHR4A6H8M9 788 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 FRG2CA6NGY1 282 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 IDSB3KWA1 339 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 E9PQ18 207 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 NPIPB9F8W1W9 429 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 H3BNH8 94 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 PEX12O00623 359 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 ADAP00813 363 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 IGKV1D-16P01601 117 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 DRD5P21918 477 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 TPD52P55327 224 aaPredicted RBP11.73□□□□□ -0.53
NELFE-209ENST00000488426 TAS2R41P59536 307 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 NPRL3Q12980 569 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 ZNF141Q15928 474 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 KCTD21Q4G0X4 260 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 MRPL2Q5T653 305 aaKnown RBP11.73□□□□□ -0.53
NELFE-209ENST00000488426 ZNF691Q5VV52 312 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 ZAR1Q86SH2 424 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 RANBP3LQ86VV4 465 aaPredicted RBP11.73□□□□□ -0.53
NELFE-209ENST00000488426 DTX1Q86Y01 620 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 GRAMD2AQ8IUY3 354 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 PARP8Q8N3A8 854 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 BCORP1Q8N888 145 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 AQP11Q8NBQ7 271 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 SETD9Q8NE22 299 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 TOR1AIP2Q8NFQ8 470 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 OR4N2Q8NGD1 307 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 OR9Q2Q8NGE9 314 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 OR1N1Q8NGS0 311 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 DIO2Q92813 273 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 SLC35B4Q969S0 331 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 PITX2Q99697 317 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 WDR54Q9H977 334 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 RLIMQ9NVW2 624 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 NXT1Q9UKK6 140 aaKnown RBP11.73□□□□□ -0.53
NELFE-209ENST00000488426 MGAT4BQ9UQ53 548 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 HSPE1-MOB4S4R3N1 261 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
NELFE-209ENST00000488426 NPIPA5A0A0B4J1W7 369 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 SH3PXD2BA1X283 911 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 NPIPA7E9PJI5 369 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 FRS3O43559 492 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 FMO6PO60774 539 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ALOX12BO75342 701 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 OR5F1O95221 314 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 NPIPA8P0DM63 369 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 FUT4P22083 530 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 RYKP34925 604 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ATP12AP54707 1039 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 PSPHP78330 225 aa11.72□□□□□ -0.53
NELFE-209ENST00000488426 ST3GAL3Q11203 375 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms