RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 SS18L1O75177 396 aaPredicted RBP13.71□□□□□ -0.21
TRIM50-203ENST00000488217 CHEK2O96017 543 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 HEXAP06865 529 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 ACP2P11117 423 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 SDC1P18827 310 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 PDE7AQ13946 482 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 MLC1Q15049 377 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 CTU2Q2VPK5 515 aaKnown RBP13.71□□□□□ -0.21
TRIM50-203ENST00000488217 PDSS1Q5T2R2 415 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 MFSD12Q6NUT3 480 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 STAC2Q6ZMT1 411 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 BEND4Q6ZU67 534 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 ESPNLQ6ZVH7 1005 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 R3HCC1LQ7Z5L2 792 aaKnown RBP13.71□□□□□ -0.21
TRIM50-203ENST00000488217 YTHDF3Q7Z739 585 aaKnown RBP13.71□□□□□ -0.21
TRIM50-203ENST00000488217 ZAR1Q86SH2 424 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 MISPQ8IVT2 679 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 EIF1ADQ8N9N8 165 aaKnown RBP13.71□□□□□ -0.21
TRIM50-203ENST00000488217 GATSQ8NAP1 163 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 OR2V1Q8NHB1 315 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 MTERF3Q96E29 417 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 NPAS1Q99742 590 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 BTBD2Q9BX70 525 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 FIS1Q9Y3D6 152 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 TRAF6Q9Y4K3 522 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 DNAJC15Q9Y5T4 150 aa13.71□□□□□ -0.21
TRIM50-203ENST00000488217 NAV3Q8IVL0 2385 aa13.71□□□□□ -0.22
TRIM50-203ENST00000488217 SMIM23A6NLE4 172 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 H7C1Q1 480 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 SCDO00767 359 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 TNFSF11O14788 317 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 HSPA4LO95757 839 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 NEFHP12036 1026 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 BCKDHAP12694 445 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 DDX5P17844 614 aaKnown RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 ME2P23368 584 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 EIF1P41567 113 aaKnown RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 ASMTP46597 345 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 PRIM2P49643 509 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 PLPPR5Q32ZL2 321 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 UGT3A2Q3SY77 523 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 BEX5Q5H9J7 111 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 HBMQ6B0K9 141 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 LRIG3Q6UXM1 1119 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 SZRD1Q7Z422 152 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 STK32CQ86UX6 486 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 TRABD2AQ86V40 505 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 B4GALNT2Q8NHY0 566 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 PPP1R14CQ8TAE6 165 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 FBXO30Q8TB52 745 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 POC1BQ8TC44 478 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 PERPQ96FX8 193 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 SH3YL1Q96HL8 342 aaPredicted RBP13.7□□□□□ -0.22
TRIM50-203ENST00000488217 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 RNF145Q96MT1 663 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 MS4A4EQ96PG1 132 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 HDHD5Q9BXW7 423 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 MID2Q9UJV3 735 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 GPR52Q9Y2T5 361 aa13.7□□□□□ -0.22
TRIM50-203ENST00000488217 EXPH5Q8NEV8 1989 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 FLNAP21333 2647 aaKnown RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 A0A1W2PQD3 144 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 LINGO3P0C6S8 592 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 PABPC4LP0CB38 370 aaKnown RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 EFNA1P20827 205 aaPredicted RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 GALNTL6Q49A17 601 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 CCNJQ5T5M9 372 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 GSPT2Q8IYD1 628 aaKnown RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 C4orf33Q8N1A6 199 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 COX18Q8N8Q8 333 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 FAM120BQ96EK7 910 aaKnown RBP13.69□□□□□ -0.22
TRIM50-203ENST00000488217 STACQ99469 402 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 GSX2Q9BZM3 304 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 HOXD1Q9GZZ0 328 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 PIGUQ9H490 435 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM185BQ9H7F4 350 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 TIGARQ9NQ88 270 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 ATP6V1HQ9UI12 483 aa13.69□□□□□ -0.22
TRIM50-203ENST00000488217 TMEM114B3SHH9 223 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 EFNA2O43921 213 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 SOX30O94993 753 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 HMGN2P05204 90 aaKnown RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 PAX1P15863 534 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ADH6P28332 368 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 NR1H2P55055 460 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 POU6F2P78424 691 aaPredicted RBP13.68□□□□□ -0.22
TRIM50-203ENST00000488217 KLHL26Q53HC5 615 aa13.68□□□□□ -0.22
TRIM50-203ENST00000488217 ARL13AQ5H913 290 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms