RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 AIREO43918 545 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 NME2P1O60361 137 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 SLC25A27O95847 323 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ZNF14P17017 642 aaPredicted RBP1.94□□□□□ -2.1
SMC4-219ENST00000487747 OTX2P32243 289 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 DLSTP36957 453 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 STX1BP61266 288 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ACTA1P68133 377 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 CYBRD1Q53TN4 286 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 SLC39A4Q6P5W5 647 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ZNF562Q6V9R5 426 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 GCNT2Q8N0V5 402 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 FAM151AQ8WW52 585 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ZNF578Q96N58 590 aaPredicted RBP1.94□□□□□ -2.1
SMC4-219ENST00000487747 PAK1IP1Q9NWT1 392 aaPredicted RBP1.94□□□□□ -2.1
SMC4-219ENST00000487747 GHRLQ9UBU3 117 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 FBXW2Q9UKT8 454 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ERVW-1Q9UQF0 538 aa1.94□□□□□ -2.1
SMC4-219ENST00000487747 ZNF705EA8MWA4 302 aaPredicted RBP1.93□□□□□ -2.1
SMC4-219ENST00000487747 FAM189A1O60320 539 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 PRPS1P60891 318 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 CDKN3Q16667 212 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 FUT11Q495W5 492 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 HECTD3Q5T447 861 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 TMEM270Q6UE05 265 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 UNQ9370/PRO34162Q6UXP9 181 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 CHCHD10Q8WYQ3 142 aaPredicted RBP1.93□□□□□ -2.1
SMC4-219ENST00000487747 PIGCQ92535 297 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 ADIPOR1Q96A54 375 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 FAM210BQ96KR6 192 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 OR2M2Q96R28 347 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 ZNF2Q9BSG1 426 aaPredicted RBP1.93□□□□□ -2.1
SMC4-219ENST00000487747 NDUFAF3Q9BU61 184 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 KRTAP4-1Q9BYQ7 146 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 COPS7BQ9H9Q2 264 aaPredicted RBP1.93□□□□□ -2.1
SMC4-219ENST00000487747 RBM28Q9NW13 759 aaKnown RBP1.93□□□□□ -2.1
SMC4-219ENST00000487747 NEUROG3Q9Y4Z2 214 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 CABIN1Q9Y6J0 2220 aa1.93□□□□□ -2.1
SMC4-219ENST00000487747 OTOGLQ3ZCN5 2332 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 MAP3K15Q6ZN16 1313 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 ITGB4P16144 1822 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 KIR2DS1A0A191URI9 304 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 TCF7P36402 384 aaPredicted RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 CNN1P51911 297 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 MRPS6P82932 125 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 CSTF1Q05048 431 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 SRYQ05066 204 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 KIR2DS1Q14954 304 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 PKN2Q16513 984 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 FAM83EQ2M2I3 478 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 PARP6Q2NL67 630 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 LRIT3Q3SXY7 679 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 KRTAP13-2Q52LG2 175 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 IFNEQ86WN2 208 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 ARFGAP2Q8N6H7 521 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 WDR36Q8NI36 951 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 TRUB1Q8WWH5 349 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 SPATA17Q96L03 361 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 CBWD1Q9BRT8 395 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 PELOQ9BRX2 385 aaKnown RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 FAM213AQ9BRX8 229 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 C6orf203Q9P0P8 240 aaPredicted RBP1.92□□□□□ -2.1
SMC4-219ENST00000487747 DOCK9Q9BZ29 2069 aa1.92□□□□□ -2.1
SMC4-219ENST00000487747 ZNF320A2RRD8 509 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 TMEM89A2RUT3 159 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 H0YL77 283 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 PCCBP05166 539 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 ADRB3P13945 408 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 AREGP15514 252 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 CTNNA1P35221 906 aaKnown RBP1.91□□□□□ -2.1
SMC4-219ENST00000487747 ST3GAL3Q11203 375 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 RCN2Q14257 317 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 ZSWIM7Q19AV6 140 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 PVRIGQ6DKI7 326 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 SLC25A34Q6PIV7 304 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 NET1Q7Z628 596 aaPredicted RBP1.91□□□□□ -2.1
SMC4-219ENST00000487747 OR10G2Q8NGC3 310 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 DNAJA4Q8WW22 397 aaPredicted RBP1.91□□□□□ -2.1
SMC4-219ENST00000487747 STARD8Q92502 1023 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 PHYHIPQ92561 330 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 CEP170P1Q96L14 293 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 COQ7Q99807 217 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 MAGT1Q9H0U3 335 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 TPK1Q9H3S4 243 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 GDAP2Q9NXN4 497 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 MTRF1LQ9UGC7 380 aaKnown RBP1.91□□□□□ -2.1
SMC4-219ENST00000487747 OPN4Q9UHM6 478 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 CLCA3PQ9Y6N3 262 aa1.91□□□□□ -2.1
SMC4-219ENST00000487747 LOC100131303A0A0U1RQF7 123 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 COLCA2A8K830 154 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 GFYI3L273 518 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 TLR4O00206 839 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 OR10H3O60404 316 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 CXCL14O95715 111 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 MOSP00540 346 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 SLC35G4P0C7Q5 338 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 GNSP15586 552 aa1.9□□□□□ -2.11
SMC4-219ENST00000487747 PRDX3P30048 256 aaKnown RBP1.9□□□□□ -2.11
SMC4-219ENST00000487747 CSNK1G2P78368 415 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms