RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 CRISP3P54108 245 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 ZNF117Q03924 483 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 ZNF630Q2M218 657 aaPredicted RBP17.79■□□□□ 0.44
SEC22A-208ENST00000487572 GKAP1Q5VSY0 366 aaPredicted RBP17.79■□□□□ 0.44
SEC22A-208ENST00000487572 TMCO5AQ8N6Q1 288 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 NEIL3Q8TAT5 605 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 LRRC58Q96CX6 371 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 ZG16BQ96DA0 208 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 DTNBP1Q96EV8 351 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 OR2B2Q9GZK3 357 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 SAP130Q9H0E3 1048 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 A4GALTQ9NPC4 353 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 CALML5Q9NZT1 146 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 SPRR3Q9UBC9 169 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 CARD8Q9Y2G2 431 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 NBASA2RRP1 2371 aa17.79■□□□□ 0.44
SEC22A-208ENST00000487572 SVILO95425 2214 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 IGLV3-32A0A0A0MS00 114 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 A0A1B0GVC2 190 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 AQP7O14520 342 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 AIM2O14862 343 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 SUSD5O60279 629 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 CYP7B1O75881 506 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 UBL4AP11441 157 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 BMP2P12643 396 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 GPX2P18283 190 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 HK1P19367 917 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
SEC22A-208ENST00000487572 DSCR4P56555 118 aaPredicted RBP17.78■□□□□ 0.44
SEC22A-208ENST00000487572 KCNC4Q03721 635 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 GNA13Q14344 377 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 CYP51A1Q16850 503 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 C1QL3Q5VWW1 255 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 MTERF4Q7Z6M4 381 aaKnown RBP17.78■□□□□ 0.44
SEC22A-208ENST00000487572 B4GALNT2Q8NHY0 566 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 NFKBIDQ8NI38 313 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 MTHFD2LQ9H903 347 aaPredicted RBP17.78■□□□□ 0.44
SEC22A-208ENST00000487572 HHATLQ9HCP6 504 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 GID8Q9NWU2 228 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 GMEB1Q9Y692 573 aa17.78■□□□□ 0.44
SEC22A-208ENST00000487572 FXYD1O00168 92 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 DCTN3O75935 186 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 CSTAP01040 98 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 MSX1P28360 303 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 CCR4P51679 360 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 CASP6P55212 293 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 C3AR1Q16581 482 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 RABL3Q5HYI8 236 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 NANOGP8Q6NSW7 305 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 CBLN3Q6UW01 205 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 ARSKQ6UWY0 536 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 EIF3MQ7L2H7 374 aaKnown RBP17.77■□□□□ 0.44
SEC22A-208ENST00000487572 CD163Q86VB7 1156 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 IFNEQ86WN2 208 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 OR5M9Q8NGP3 310 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 FAM57AQ8TBR7 257 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 C1GALT1C1Q96EU7 318 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 LRRC37BQ96QE4 947 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 TREX2Q9BQ50 279 aaPredicted RBP17.77■□□□□ 0.44
SEC22A-208ENST00000487572 NANOGQ9H9S0 305 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 TINAGQ9UJW2 476 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 ACAD8Q9UKU7 415 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 VDAC3Q9Y277 283 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 ZNF835Q9Y2P0 537 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 L3MBTL1Q9Y468 752 aa17.77■□□□□ 0.44
SEC22A-208ENST00000487572 AGAP5A6NIR3 686 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 CLDN24A6NM45 220 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 PRRG2O14669 202 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 ZNF264O43296 627 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 ZIC3O60481 467 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 NUDT14O95848 222 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 NPPAP01160 153 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 UBTFL6P0CB48 400 aaPredicted RBP17.76■□□□□ 0.43
SEC22A-208ENST00000487572 ARAFP10398 606 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 GCKP35557 465 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 CDK6Q00534 326 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 FGFBP1Q14512 234 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 GANABQ14697 944 aaKnown RBP17.76■□□□□ 0.43
SEC22A-208ENST00000487572 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.76■□□□□ 0.43
SEC22A-208ENST00000487572 RAET1LQ5VY80 246 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 C3P1Q6ZMU1 363 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 PEX5LQ8IYB4 626 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 CCDC197Q8NCU1 140 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 OR5M1Q8NGP8 315 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 WDR60Q8WVS4 1066 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 SARAFQ96BY9 339 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 CMTM5Q96DZ9 223 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 SFXN2Q96NB2 322 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 KLHDC3Q9BQ90 382 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 PIF1Q9H611 641 aa17.76■□□□□ 0.43
SEC22A-208ENST00000487572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.76■□□□□ 0.43
SEC22A-208ENST00000487572 A0A0G2JPF8 293 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 OR14I1A6ND48 311 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 HNRNPCL2B2RXH8 293 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 HNRNPCL3B7ZW38 293 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 SHISA8B8ZZ34 492 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 FAM47E-STBD1D6RA91 191 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 HNRNPCL1O60812 293 aaKnown RBP17.75■□□□□ 0.43
SEC22A-208ENST00000487572 STSP08842 583 aa17.75■□□□□ 0.43
SEC22A-208ENST00000487572 HNRNPCL4P0DMR1 293 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms