RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TFAP2EQ6VUC0 442 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 GTF2IRD2Q86UP8 949 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZNF619Q8N2I2 560 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 POC1BQ8TC44 478 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ACTRT2Q8TDY3 377 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 RNF128Q8TEB7 428 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ABHD3Q8WU67 409 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ROBO4Q8WZ75 1007 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 HOXB13Q92826 284 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 OSTF1Q92882 214 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZBED6CLQ96FA7 236 aaPredicted RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 KLHL15Q96M94 604 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 FMO2Q99518 471 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 HDHD5Q9BXW7 423 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 ESRP2Q9H6T0 727 aaKnown RBP17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 HHATLQ9HCP6 504 aa17.31■□□□□ 0.36
SMPDL3A-202ENST00000487215 PRR14LQ5THK1 2151 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 A0A1W2PP18 115 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ADAM11O75078 769 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 NDUFS7O75251 213 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 NKX2-2O95096 273 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SNRPAP09012 282 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 PRPS2P11908 318 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ME2P23368 584 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 IL32P24001 234 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SHC1P29353 583 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZNF41P51814 821 aaPredicted RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 PRKAA2P54646 552 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 FOXA1P55317 472 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 FAPQ12884 760 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 HSPB3Q12988 150 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZNF239Q16600 458 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 PGGHGQ32M88 737 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 GLE1Q53GS7 698 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 TMEM201Q5SNT2 666 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SFRP5Q5T4F7 317 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SEZ6L2Q6UXD5 910 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZNF551Q7Z340 670 aaPredicted RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 NUFIP2Q7Z417 695 aaKnown RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ZAR1Q86SH2 424 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 MMGT1Q8N4V1 131 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 TMEM158Q8WZ71 300 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 L3HYPDHQ96EM0 354 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SH3YL1Q96HL8 342 aaPredicted RBP17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 NGBQ9NPG2 151 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 SNX8Q9Y5X2 465 aa17.3■□□□□ 0.36
SMPDL3A-202ENST00000487215 ADH6P28332 368 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 CARD18P57730 90 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 DNAJC14Q6Y2X3 702 aaPredicted RBP17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 IKBIPQ70UQ0 350 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 TRABD2AQ86V40 505 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 TUSC5Q8IXB3 177 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 LILRA2Q8N149 483 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 IFT81Q8WYA0 676 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 HSD17B8Q92506 261 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 SRXN1Q9BYN0 137 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 GSTO2Q9H4Y5 243 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 LRTM1Q9HBL6 345 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 KLHL13Q9P2N7 655 aa17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 GDF2Q9UK05 429 aaPredicted RBP17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 WBP11Q9Y2W2 641 aaKnown RBP17.29■□□□□ 0.36
SMPDL3A-202ENST00000487215 A0A087WUV0 522 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 UBFD1O14562 309 aaKnown RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 PABPC4LP0CB38 370 aaKnown RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 SFTPDP35247 375 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 BSPH1Q075Z2 132 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 CHRFAM7AQ494W8 412 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 VPS26BQ4G0F5 336 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 SLC22A9Q8IVM8 553 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 BANPQ8N9N5 519 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 CDRT4Q8N9R6 151 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 FAM76AQ8TAV0 307 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 FBXO30Q8TB52 745 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 PIWIL2Q8TC59 973 aaKnown RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 FAM110BQ8TC76 370 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 REXO5Q96IC2 774 aaKnown RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 HS6ST2Q96MM7 605 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 TRAF4Q9BUZ4 470 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 POTEKPQ9BYX7 375 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 TRIM2Q9C040 744 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 MID1IP1Q9NPA3 183 aa17.28■□□□□ 0.36
SMPDL3A-202ENST00000487215 ABCA1O95477 2261 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 DPRXA6NFQ7 191 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 A8MV72 311 aaPredicted RBP17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 KCNK2O95069 426 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 ADAP00813 363 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 LINGO3P0C6S8 592 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 ACP2P11117 423 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 GPC1P35052 558 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 PRIM2P49643 509 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 PRKAG1P54619 331 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 FOXF1Q12946 379 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 RNPS1Q15287 305 aaKnown RBP17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 CD226Q15762 336 aa17.27■□□□□ 0.36
SMPDL3A-202ENST00000487215 ANKRD26P1Q6NSI1 321 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms