RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 BPIFA2Q96DR5 249 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 MAN2C1Q9NTJ4 1040 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 HEMK1Q9Y5R4 338 aaPredicted RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 ARPC1BO15143 372 aaKnown RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 SYT7O43581 403 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 EIF2B1Q14232 305 aaKnown RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 NSDHLQ15738 373 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 SLC5A12Q1EHB4 618 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 DEFB110Q30KQ9 67 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 PGGHGQ32M88 737 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 SLC39A5Q6ZMH5 540 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 PARS2Q7L3T8 475 aaKnown RBP15.47■□□□□ 0.07
COL7A1-210ENST00000487017 KCTD20Q7Z5Y7 419 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 DNAJC22Q8N4W6 341 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 HORMAD2Q8N7B1 307 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 ISL2Q96A47 359 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 ALOXE3Q9BYJ1 711 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 OR52D1Q9H346 318 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 PCDHGA6Q9Y5G7 932 aa15.47■□□□□ 0.07
COL7A1-210ENST00000487017 CHD4Q14839 1912 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ARAFP10398 606 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NTHL1P78549 312 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 RAET1LQ5VY80 246 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 PELI3Q8N2H9 469 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 OR5T1Q8NG75 326 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 SYNPRQ8TBG9 265 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 TRMT2BQ96GJ1 504 aaKnown RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 OR52A4PA6NMU1 304 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 CNOT4O95628 575 aaKnown RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 RABIFP47224 123 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 FASLGP48023 281 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 DLX2Q07687 328 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 MEPCEQ7L2J0 689 aaKnown RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 METTL4Q8N3J2 472 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 PGBD5Q8N414 524 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 C4orf36Q96KX1 117 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 PBDC1Q9BVG4 233 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 SLC25A18Q9H1K4 315 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF442Q9H7R0 627 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NCDNQ9UBB6 729 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 REV1Q9UBZ9 1251 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ENTPD2Q9Y5L3 495 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 LOC102723532A0A0G2JNH3 316 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 TVP23AA6NH52 213 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 BRINP1O60477 761 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 RAB3DO95716 219 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NUDT7P0C024 238 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 SLC2A5P22732 501 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 BMPR1AP36894 532 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ZNF91Q05481 1191 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 SERTAD2Q14140 314 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ENTPD8Q5MY95 495 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 ELP2Q6IA86 826 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 KIAA1211LQ6NV74 962 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 TRIM46Q7Z4K8 759 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 LRRC28Q86X40 367 aaPredicted RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NLGN4XQ8N0W4 816 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 OR8J2Q8NGG1 315 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 RASD1Q9Y272 281 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 CYCSP99999 105 aaKnown RBP15.46■□□□□ 0.07
COL7A1-210ENST00000487017 HOXC5Q00444 222 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NT5C3BQ969T7 300 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NT5DC2Q9H857 520 aa15.46■□□□□ 0.07
COL7A1-210ENST00000487017 NPIPA5A0A0B4J1W7 369 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 NPIPA7E9PJI5 369 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 CTDSP2O14595 271 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 ALDOBP05062 364 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 NPIPA8P0DM63 369 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 CDK2P24941 298 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 CRABP1P29762 137 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 MRPL49Q13405 166 aaKnown RBP15.46■□□□□ 0.06
COL7A1-210ENST00000487017 MFSD13AQ14CX5 517 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 NHSL2Q5HYW2 709 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 FAM69BQ5VUD6 431 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 ZSCAN1Q8NBB4 408 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 UBTD2Q8WUN7 234 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 OR7D2Q96RA2 312 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 BABAM2Q9NXR7 383 aa15.46■□□□□ 0.06
COL7A1-210ENST00000487017 LOC105369274A0A096LPK9 316 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 SPDEFO95238 335 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 C1SP09871 688 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 AKAIN1P0CW23 69 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 SLC6A8P48029 635 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 NKPD1Q17RQ9 610 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 Q6ZPB1 254 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 TMPPEQ6ZT21 453 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 OR4N4Q8N0Y3 316 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 CHPT1Q8WUD6 406 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ZNF296Q8WUU4 475 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 RPL3LQ92901 407 aaKnown RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 MYADMQ96S97 322 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 APOOQ9BUR5 198 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ACTR10Q9NZ32 417 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 UBE2J1Q9Y385 318 aaPredicted RBP15.45■□□□□ 0.06
COL7A1-210ENST00000487017 A0A0A6YYH2 397 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 CIB4A0PJX0 185 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 A6NJ64 397 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 ADAMTS4O75173 837 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 S100PP25815 95 aa15.45■□□□□ 0.06
COL7A1-210ENST00000487017 CAMLGP49069 296 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms