RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 EXOSC3Q9NQT5 275 aaKnown RBP8.76□□□□□ -1.01
MCF2L-227ENST00000486806 ADPRHL2Q9NX46 363 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 DNAJB12Q9NXW2 375 aaKnown RBP8.76□□□□□ -1.01
MCF2L-227ENST00000486806 PLA2G3Q9NZ20 509 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 KLRF1Q9NZS2 232 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 CNIH4Q9P003 139 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 RPS6KA6Q9UK32 745 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 SLC35A3Q9Y2D2 325 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 PCDHGB7Q9Y5F8 929 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 CSAG2Q9Y5P2 127 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 WIF1Q9Y5W5 379 aa8.76□□□□□ -1.01
MCF2L-227ENST00000486806 A0A0G2JMM0 328 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 A0A1W2PPB8 328 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 A0A1W2PRS3 328 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 KIR3DP1A8MWS1 328 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 MKRN2OSH3BPM6 223 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SUV39H1O43463 412 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SCO2O43819 266 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 NME2P1O60361 137 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ADAM11O75078 769 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 PRKD3O94806 890 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 STAMBPO95630 424 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF682O95780 498 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ANGPTL1O95841 491 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 LGI1O95970 557 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 FESP07332 822 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 UBL4AP11441 157 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 HPGDP15428 266 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 NME2P22392 152 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ARG2P78540 354 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF117Q03924 483 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SKP2Q13309 424 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 KPNB1Q14974 876 aaKnown RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 NRF1Q16656 503 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ZSWIM7Q19AV6 140 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 PRAMEF20Q5VT98 475 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SLC22A10Q63ZE4 541 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SLC30A6Q6NXT4 461 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 MARCH3Q86UD3 253 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ADGRG5Q8IZF4 528 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 CLIP4Q8N3C7 705 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF614Q8N883 585 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 GATSQ8NAP1 163 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 OR4D11Q8NGI4 311 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 OR10Q1Q8NGQ4 319 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SLC26A7Q8TE54 656 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 TM9SF4Q92544 642 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 CNOT9Q92600 299 aaKnown RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 POP5Q969H6 163 aaKnown RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 TMEM41AQ96HV5 264 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 LRGUKQ96M69 825 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 WFDC6Q9BQY6 131 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 DOHHQ9BU89 302 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 HES7Q9BYE0 225 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 CACYBPQ9HB71 228 aaKnown RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 SACM1LQ9NTJ5 587 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 DEPPQ9NTK1 212 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 RLIMQ9NVW2 624 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 TUBD1Q9UJT1 453 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 BAG5Q9UL15 447 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 PCDHGB6Q9Y5F9 930 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 URB1O60287 2271 aaKnown RBP8.75□□□□□ -1.01
MCF2L-227ENST00000486806 EXPH5Q8NEV8 1989 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 ZZEF1O43149 2961 aa8.75□□□□□ -1.01
MCF2L-227ENST00000486806 PTPRQQ9UMZ3 2332 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 DHRS12A0PJE2 317 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 LRRC3CA6NJW4 275 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 H3BNH8 94 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 K7EM74 188 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 M0R3H8 397 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 SNPHO15079 494 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF264O43296 627 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 OIP5O43482 229 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 NDUFB5O43674 189 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 TRIM3O75382 744 aaPredicted RBP8.74□□□□□ -1.01
MCF2L-227ENST00000486806 SNX4O95219 450 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 CSTAP01040 98 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 P04436 131 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 GPIP06744 558 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 UBTFL6P0CB48 400 aaPredicted RBP8.74□□□□□ -1.01
MCF2L-227ENST00000486806 TNFRSF1BP20333 461 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 ENDOUP21128 410 aaKnown RBP8.74□□□□□ -1.01
MCF2L-227ENST00000486806 MAGEA2P43356 314 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 CLK3P49761 638 aaKnown RBP8.74□□□□□ -1.01
MCF2L-227ENST00000486806 ZNF136P52737 540 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 RHDQ02161 417 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 KCNAB2Q13303 367 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 NPTX1Q15818 432 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 IQCCQ4KMZ1 466 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 IFI44LQ53G44 452 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 CBLN3Q6UW01 205 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 TSEN54Q7Z6J9 526 aaKnown RBP8.74□□□□□ -1.01
MCF2L-227ENST00000486806 SPATA24Q86W54 205 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 LACC1Q8IV20 430 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 FADS6Q8N9I5 356 aa8.74□□□□□ -1.01
MCF2L-227ENST00000486806 CATSPER1Q8NEC5 780 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms