RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GLB1P16278 677 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 ARL4DP49703 201 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 TMEM44Q2T9K0 475 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 KLHL22Q53GT1 634 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 C19orf48Q6RUI8 117 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 NPSR1Q6W5P4 371 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 SLC35F3Q8IY50 421 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 SLC35B4Q969S0 331 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 MVB12AQ96EY5 273 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 G6PC3Q9BUM1 346 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 TMEM27Q9HBJ8 222 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 ZBTB20Q9HC78 741 aaPredicted RBP18.84■□□□□ 0.61
HPS3-206ENST00000486530 GMEB2Q9UKD1 530 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 VCANP13611 3396 aa18.84■□□□□ 0.61
HPS3-206ENST00000486530 KDM4EB2RXH2 506 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 TMEM150CB9EJG8 249 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 IFNA16P05015 189 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 OPRL1P41146 370 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 RNF144AP50876 292 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 PGDP52209 483 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 PSMD4P55036 377 aaKnown RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 GPLD1P80108 840 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.83■□□□□ 0.6
HPS3-206ENST00000486530 SIGLEC14Q08ET2 396 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 KCNAB1Q14722 419 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 TSTQ16762 297 aaKnown RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 PGGHGQ32M88 737 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 MINDY4Q4G0A6 757 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 WDR88Q6ZMY6 472 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 WDR5BQ86VZ2 330 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 SLC15A4Q8N697 577 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 ZNF614Q8N883 585 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 PROKR2Q8NFJ6 384 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 KBTBD8Q8NFY9 601 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 OR4N2Q8NGD1 307 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 OR52I1Q8NGK6 324 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 OR4Q3Q8NH05 313 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 SH3YL1Q96HL8 342 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 TAPBPLQ9BX59 468 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 OR10A5Q9H207 317 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 PRMT8Q9NR22 394 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 TMEM5Q9Y2B1 443 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 MMACHCQ9Y4U1 282 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 NUP210LQ5VU65 1888 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 USP34Q70CQ2 3546 aa18.83■□□□□ 0.6
HPS3-206ENST00000486530 MN1Q10571 1320 aaPredicted RBP18.83■□□□□ 0.6
HPS3-206ENST00000486530 UNC119BA6NIH7 251 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CDC42EP2O14613 210 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 MYL12BO14950 172 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 SURF4O15260 269 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CSO75390 466 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 SCG5P05408 212 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 TGFBR1P36897 503 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 PRKCDQ05655 676 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 RAB40BQ12829 278 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 C1DQ13901 141 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 SPHARQ15513 63 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 ZNF141Q15928 474 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 SLC30A6Q6NXT4 461 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 C11orf74Q86VG3 221 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 SLC25A45Q8N413 288 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 NANOGP1Q8N7R0 232 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 RCBTB1Q8NDN9 531 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 ANKK1Q8NFD2 765 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 OR2T33Q8NG76 320 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 C16orf52Q8NHV5 167 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 S100ZQ8WXG8 99 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CNOT9Q92600 299 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 PLEKHA8Q96JA3 519 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 OPALINQ96PE5 141 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 HMG20AQ9NP66 347 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 PRODH2Q9UF12 536 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 OR2W5A6NFC9 320 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 GRK5P34947 590 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 SEPHS1P49903 392 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 LIMK1P53667 647 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 BNC1Q01954 994 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 FGFBP1Q14512 234 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 ZNF846Q147U1 533 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 TTLL10Q6ZVT0 673 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 MED25Q71SY5 747 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CACTIN-AS1Q8N1I8 211 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 ZNF615Q8N8J6 731 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 OR7G1Q8NGA0 311 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 RNF217Q8TC41 542 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 BRIX1Q8TDN6 353 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 OR1F2PQ96R84 312 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 WDR12Q9GZL7 423 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 SLIRPQ9GZT3 109 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 OR51E2Q9H255 320 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 FGF20Q9NP95 211 aaPredicted RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 FBXO8Q9NRD0 319 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 LANCL2Q9NS86 450 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 DNAJB12Q9NXW2 375 aaKnown RBP18.82■□□□□ 0.6
HPS3-206ENST00000486530 SEMA5BQ9P283 1151 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CLEC2DQ9UHP7 191 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 CBLCQ9ULV8 474 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 GPR52Q9Y2T5 361 aa18.82■□□□□ 0.6
HPS3-206ENST00000486530 MAU2Q9Y6X3 613 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms