RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NDUFAF5Q5TEU4 345 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 SAXO2Q658L1 398 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 MEX3BQ6ZN04 569 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ZDHHC13Q8IUH4 622 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 GALNT4Q8N4A0 578 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ZFP62Q8NB50 900 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ACBD4Q8NC06 268 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PSD4Q8NDX1 1056 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 OR2M7Q8NG81 312 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 FBXO30Q8TB52 745 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 SFXN5Q8TD22 340 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 LZICQ8WZA0 190 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 NRGNQ92686 78 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ANKRD9Q96BM1 317 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 NRBF2Q96F24 287 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 VMP1Q96GC9 406 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 RASL10BQ96S79 203 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 SERINC2Q96SA4 455 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 VKORC1Q9BQB6 163 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ALOXE3Q9BYJ1 711 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 OR8D2Q9GZM6 311 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ENKD1Q9H0I2 346 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 IL1RAPQ9NPH3 570 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC35C2Q9NQQ7 365 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PNPLA3Q9NST1 481 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 DAPP1Q9UN19 280 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 PPIEQ9UNP9 301 aaKnown RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ERVK-11Q9UQG0 969 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 RNF6Q9Y252 685 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ANGPT4Q9Y264 503 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 KLF13Q9Y2Y9 288 aaPredicted RBP8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 MMACHCQ9Y4U1 282 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ASB4Q9Y574 426 aa8.62□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF407Q9C0G0 2248 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 A0A1W2PS29 197 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TMEM247A6NEH6 219 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 MYO1GB0I1T2 1018 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 KDM4EB2RXH2 506 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 KLRC4-KLRK1H3BQV0 150 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 GNGT2O14610 69 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ACOX3O15254 700 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 B3GALT2O43825 422 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TPST1O60507 370 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ZFAND5O76080 213 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TOXO94900 526 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SLITRK5O94991 958 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TNFAIP8O95379 198 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CST1P01037 141 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 LYNP07948 512 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CCL3P10147 92 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ARAFP10398 606 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CSNK2A2P19784 350 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TLX1P31314 330 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 BUD31P41223 144 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CRATP43155 626 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ALDH9A1P49189 494 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SSR4P51571 173 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ARHGDIAP52565 204 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 MVDP53602 400 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 HSD17B7P56937 341 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 PPIAP62937 165 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SKP1P63208 163 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TFF3Q07654 80 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 PMPCAQ10713 525 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SLAMF1Q13291 335 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 GNA13Q14344 377 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CEBPEQ15744 281 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 NHSL2Q5HYW2 709 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 RTL6Q6ICC9 239 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ENPP6Q6UWR7 440 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ZNF551Q7Z340 670 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ST13P4Q8IZP2 240 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 OR5K1Q8NHB7 308 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CA5BP1Q8WTZ4 195 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 PHF10Q8WUB8 498 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ASB15Q8WXK1 588 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CIDECQ96AQ7 238 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SLC29A1Q99808 456 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 RBM4BQ9BQ04 359 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 DOHHQ9BU89 302 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CNPPD1Q9BV87 410 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 RBM4Q9BWF3 364 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 NPLQ9BXD5 320 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ANKRD60Q9BZ19 345 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 TTTY12Q9BZ98 90 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 RUBCNLQ9H714 662 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 CLK4Q9HAZ1 481 aaKnown RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 LYRM4Q9HD34 91 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 A4GALTQ9NPC4 353 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 ADAP2Q9NPF8 381 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 SMPD3Q9NY59 655 aaPredicted RBP8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 USE1Q9NZ43 259 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 MYOTQ9UBF9 498 aa8.61□□□□□ -1.03
TMEM39A-208ENST00000486159 UTS2RQ9UKP6 389 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms