RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 TGM6O95932 706 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 TMIGD3P0DMS9 266 aaPredicted RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 ATP6V1C1P21283 382 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 MATN1P21941 496 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 IL12AP29459 219 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 ASCL1P50553 236 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 SNTB1Q13884 538 aaKnown RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 FAM174BQ3ZCQ3 159 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 MAVSQ7Z434 540 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 SPATA19Q7Z5L4 167 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 MISPQ8IVT2 679 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 GOT1L1Q8NHS2 421 aaPredicted RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 ZNF75CPQ92670 426 aaPredicted RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 SH3YL1Q96HL8 342 aaPredicted RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 MAELQ96JY0 434 aaKnown RBP17.64■□□□□ 0.41
SNX5-213ENST00000486039 TM9SF2Q99805 663 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 PCDHGB4Q9UN71 923 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 L3MBTL1Q9Y468 752 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 GPR45Q9Y5Y3 372 aa17.64■□□□□ 0.41
SNX5-213ENST00000486039 C9JVG2 144 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 NPIPB9F8W1W9 429 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 SLCO1B7G3V0H7 640 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 ZNF195O14628 629 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 IL18BPO95998 194 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 OPRM1P35372 400 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 RNF144AP50876 292 aaPredicted RBP17.63■□□□□ 0.41
SNX5-213ENST00000486039 CASP9P55211 416 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 CLDN20P56880 219 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 DPY19L1Q2PZI1 675 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 FBXL19-AS1Q494R0 122 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 FLYWCH1Q4VC44 716 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 SLC9B1Q4ZJI4 515 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 KLHL26Q53HC5 615 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 TTMPQ5BVD1 217 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNX5-213ENST00000486039 CDH24Q86UP0 819 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 MEIOBQ8N635 442 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 VPS37AQ8NEZ2 397 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 ACTRT2Q8TDY3 377 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 INTS12Q96CB8 462 aaKnown RBP17.63■□□□□ 0.41
SNX5-213ENST00000486039 SLC35G5Q96KT7 338 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 ZFP3Q96NJ6 502 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 SDF2Q99470 211 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 HOXD1Q9GZZ0 328 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 HHATLQ9HCP6 504 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 MED17Q9NVC6 651 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 JKAMPQ9P055 326 aa17.63■□□□□ 0.41
SNX5-213ENST00000486039 INTS1Q8N201 2190 aaKnown RBP17.63■□□□□ 0.41
SNX5-213ENST00000486039 A0A087WZY1 265 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 SEC14L5O43304 696 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 UQCRC2P22695 453 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 UQCRC1P31930 480 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 S100A3P33764 101 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 ATP12AP54707 1039 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 ZNF117Q03924 483 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 GRAMD2AQ8IUY3 354 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 GCNT2Q8N0V5 402 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 CHDHQ8NE62 594 aaPredicted RBP17.62■□□□□ 0.41
SNX5-213ENST00000486039 B4GALNT2Q8NHY0 566 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 PIWIL2Q8TC59 973 aaKnown RBP17.62■□□□□ 0.41
SNX5-213ENST00000486039 PHOSPHO1Q8TCT1 267 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 MIPOL1Q8TD10 442 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 RNASE6Q93091 150 aaKnown RBP17.62■□□□□ 0.41
SNX5-213ENST00000486039 ATP6V1G3Q96LB4 118 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 OR51I1Q9H343 314 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 KCNN3Q9UGI6 736 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 AP4B1Q9Y6B7 739 aa17.62■□□□□ 0.41
SNX5-213ENST00000486039 DUXAA6NLW8 204 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 OIP5O43482 229 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 C1QCP02747 245 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 PSMA4P25789 261 aaKnown RBP17.61■□□□□ 0.41
SNX5-213ENST00000486039 PLPPR5Q32ZL2 321 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 SAXO2Q658L1 398 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 NXNQ6DKJ4 435 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 CBLN3Q6UW01 205 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 CHMP1BQ7LBR1 199 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 OLIG3Q7RTU3 272 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 MTERF4Q7Z6M4 381 aaKnown RBP17.61■□□□□ 0.41
SNX5-213ENST00000486039 GGNQ86UU5 652 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 GTPBP8Q8N3Z3 284 aaPredicted RBP17.61■□□□□ 0.41
SNX5-213ENST00000486039 ZNF527Q8NB42 609 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 POC1BQ8TC44 478 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 SMPDL3BQ92485 455 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 FIG4Q92562 907 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 ZNF845Q96IR2 970 aaPredicted RBP17.61■□□□□ 0.41
SNX5-213ENST00000486039 DOCK7Q96N67 2140 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 CCDC115Q96NT0 180 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 SFXN3Q9BWM7 321 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 BTNL2Q9UIR0 455 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 CCDC168Q8NDH2 2452 aa17.61■□□□□ 0.41
SNX5-213ENST00000486039 SLC22A20A6NK97 555 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 EEF1E1-BLOC1S5C9J1V9 151 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 EEF1E1O43324 174 aaKnown RBP17.6■□□□□ 0.41
SNX5-213ENST00000486039 FCMRO60667 390 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 TNFRSF21O75509 655 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 PGRP06401 933 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 OR12D1P0DN82 309 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 ZNF17P17021 662 aa17.6■□□□□ 0.41
SNX5-213ENST00000486039 EEFSECP57772 596 aaKnown RBP17.6■□□□□ 0.41
SNX5-213ENST00000486039 TESK1Q15569 626 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms