RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ARSKQ6UWY0 536 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 SPATA19Q7Z5L4 167 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 KIF18BQ86Y91 864 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 Q8N3U1 123 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 NAXEQ8NCW5 288 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 CHDHQ8NE62 594 aaPredicted RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 CLHC1Q8NHS4 586 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 ADAMTS15Q8TE58 950 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 PIK3R3Q92569 461 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 SLC9A6Q92581 669 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 PMM1Q92871 262 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 RNASE6Q93091 150 aaKnown RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 C16orf58Q96GQ5 468 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 MAELQ96JY0 434 aaKnown RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 SH3GL2Q99962 352 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 SFXN3Q9BWM7 321 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 PIGMQ9H3S5 423 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 CXorf36Q9H7Y0 433 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 ZNF395Q9H8N7 513 aaPredicted RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 ZCCHC3Q9NUD5 404 aaKnown RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 PAQR5Q9NXK6 330 aaPredicted RBP6.33□□□□□ -1.4
VPS50-218ENST00000485994 MED11Q9P086 117 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 CLCF1Q9UBD9 225 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 GIMAP2Q9UG22 337 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 ZNF337Q9Y3M9 751 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 L3MBTL1Q9Y468 752 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 FREM1Q5H8C1 2179 aa6.33□□□□□ -1.4
VPS50-218ENST00000485994 TMEM120BA0PK00 339 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 OR2M5A3KFT3 312 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 TRPC5OSA6NMA1 111 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 FAM90A27PA6NNH2 459 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 CLCA1A8K7I4 914 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 KDM4EB2RXH2 506 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 NPIPB9F8W1W9 429 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 ETV2O00321 342 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 ADAMDEC1O15204 470 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 HDAC3O15379 428 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 SCO2O43819 266 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 EIF4E2O60573 245 aaKnown RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 DNAJA2O60884 412 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 C6orf47O95873 294 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 AGR2O95994 175 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 IL11P20809 199 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 BGNP21810 368 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 UQCRC2P22695 453 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 PSMA4P25789 261 aaKnown RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 EIF1P41567 113 aaKnown RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 MAGEA8P43361 318 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 PHC1P78364 1004 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 RELBQ01201 579 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 TLE4Q04727 773 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 TP53BP2Q13625 1128 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 CASP8Q14790 479 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 LASP1Q14847 261 aaKnown RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 ARHGAP11BQ3KRB8 267 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 AGBL2Q5U5Z8 902 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 C6orf120Q7Z4R8 191 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 WDR53Q7Z5U6 358 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 LURAP1LQ8IV03 231 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 GTPBP8Q8N3Z3 284 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 KRTCAP2Q8N6L1 136 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 COX18Q8N8Q8 333 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 C9orf106Q8NAJ2 232 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 RELL2Q8NC24 303 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 GLB1L3Q8NCI6 653 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 AGR3Q8TD06 166 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 FAM222BQ8WU58 562 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 ZBTB8AQ96BR9 441 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 ARSGQ96EG1 525 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 RMND5BQ96G75 393 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 SFXN2Q96NB2 322 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 TRIB1Q96RU8 372 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 SDF2Q99470 211 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 C1orf50Q9BV19 199 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 DPY30Q9C005 99 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 NMUR2Q9GZQ4 415 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 SAP130Q9H0E3 1048 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 CENPHQ9H3R5 247 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 MANSC1Q9H8J5 431 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 EQTNQ9NQ60 294 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 POLE3Q9NRF9 147 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 FLRT3Q9NZU0 649 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 BTNL2Q9UIR0 455 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 DKKL1Q9UK85 242 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 PCDHGB4Q9UN71 923 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 FAF1Q9UNN5 650 aaPredicted RBP6.32□□□□□ -1.4
VPS50-218ENST00000485994 ZNF175Q9Y473 711 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 ROS1P08922 2347 aa6.32□□□□□ -1.4
VPS50-218ENST00000485994 PRR14LQ5THK1 2151 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 F8P00451 2351 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 OTOGQ6ZRI0 2925 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 ARID1AO14497 2285 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 A8MXE2 369 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 H0Y3Z8 333 aa6.31□□□□□ -1.4
VPS50-218ENST00000485994 H3BNH8 94 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms