RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DCTN3O75935 186 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 OPN1SWP03999 348 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 SLC6A2P23975 617 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 SNTA1Q13424 505 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 TOMM34Q15785 309 aaPredicted RBP10.8□□□□□ -0.68
APTX-227ENST00000485479 DCST1Q5T197 706 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 TMEM81Q6P7N7 255 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 CHERPQ8IWX8 916 aaKnown RBP10.8□□□□□ -0.68
APTX-227ENST00000485479 RNF148Q8N7C7 305 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 OR2M3Q8NG83 312 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 OR5M9Q8NGP3 310 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 DNAJB8Q8NHS0 232 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 SPRR3Q9UBC9 169 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 DKKL1Q9UK85 242 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 TENM4Q6N022 2769 aa10.8□□□□□ -0.68
APTX-227ENST00000485479 FRS3O43559 492 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 NUDT14O95848 222 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 AGR2O95994 175 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 AK1P00568 194 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 OPN1LWP04000 364 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ELAVL4P26378 380 aaKnown RBP10.79□□□□□ -0.68
APTX-227ENST00000485479 RYKP34925 604 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SLC7A2P52569 658 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 CRISP3P54108 245 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 PSPHP78330 225 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 CDK6Q00534 326 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 FADDQ13158 208 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ART3Q13508 389 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SCARB2Q14108 478 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SLC10A1Q14973 349 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 COMTD1Q86VU5 262 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ANKS4BQ8N8V4 417 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ZNF527Q8NB42 609 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 PCYOX1LQ8NBM8 494 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 OR14L1PQ8NHC6 308 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 CMTM5Q96DZ9 223 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 B4GALT7Q9UBV7 327 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 OSGIN2Q9Y236 505 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 DTNAQ9Y4J8 743 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 C15orf38-AP3S2A0A0A6YYH1 394 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SERINC4A6NH21 518 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 C5orf58C9J3I9 102 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 GTPBP1O00178 669 aaKnown RBP10.79□□□□□ -0.68
APTX-227ENST00000485479 CSTAP01040 98 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ARAFP10398 606 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 IL7RP16871 459 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 DPP4P27487 766 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 STARP49675 285 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 CLK3P49761 638 aaKnown RBP10.79□□□□□ -0.68
APTX-227ENST00000485479 ANXA11P50995 505 aaKnown RBP10.79□□□□□ -0.68
APTX-227ENST00000485479 SLC25A3Q00325 362 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 GLIPR1L2Q4G1C9 344 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 COQ5Q5HYK3 327 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 C1QL3Q5VWW1 255 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 TRILQ7L0X0 811 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ZZZ3Q8IYH5 903 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 FADS6Q8N9I5 356 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SMYD1Q8NB12 490 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 ECSITQ9BQ95 431 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 SAP130Q9H0E3 1048 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 A4GALTQ9NPC4 353 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 TAS2R10Q9NYW0 307 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 LIPT1Q9Y234 373 aa10.79□□□□□ -0.68
APTX-227ENST00000485479 KIAA1549Q9HCM3 1950 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 AGAP5A6NIR3 686 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 H0YC42 278 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 NME4O00746 187 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 CBR3O75828 277 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 PGM3O95394 542 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 GKN3PP0CG01 181 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 UBL4AP11441 157 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 BMP2P12643 396 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 EDN3P14138 238 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 PPIBP23284 216 aaKnown RBP10.78□□□□□ -0.68
APTX-227ENST00000485479 GZMMP51124 257 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 TPD52P55327 224 aaPredicted RBP10.78□□□□□ -0.68
APTX-227ENST00000485479 CBX1P83916 185 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 HOXC5Q00444 222 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 C17orf67Q0P5P2 114 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 ZNF141Q15928 474 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 HYAL4Q2M3T9 481 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 MRPL2Q5T653 305 aaKnown RBP10.78□□□□□ -0.68
APTX-227ENST00000485479 RAET1LQ5VY80 246 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 POMZP3Q6PJE2 187 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 ZNF836Q6ZNA1 936 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 CLIP4Q8N3C7 705 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 RPRMLQ8N4K4 120 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 FAM156AQ8NDB6 213 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 OR52P1PQ8NH57 321 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 CNOT9Q92600 299 aaKnown RBP10.78□□□□□ -0.68
APTX-227ENST00000485479 DNAJA3Q96EY1 480 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 RAD21L1Q9H4I0 556 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 TMEM185BQ9H7F4 350 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 EFCAB1Q9HAE3 211 aa10.78□□□□□ -0.68
APTX-227ENST00000485479 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms