RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 TSFMP43897 325 aaKnown RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 RPS5P46782 204 aaKnown RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 RAB8AP61006 207 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 SKP1P63208 163 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 MRPS15P82914 257 aaKnown RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.96□□□□□ -0.81
DDX56-212ENST00000485367 FOXD4Q12950 439 aaPredicted RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 TIMM50Q3ZCQ8 353 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 LRIF1Q5T3J3 769 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 B3GNTL1Q67FW5 361 aaPredicted RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 ABHD13Q7L211 337 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 ANKRD37Q7Z713 158 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 CCDC190Q86UF4 302 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 GPSM1Q86YR5 675 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 ZDHHC21Q8IVQ6 265 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 SLC38A6Q8IZM9 456 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 CDYL2Q8N8U2 506 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 ANKRD53Q8N9V6 530 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 OR1N1Q8NGS0 311 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 METTL6Q8TCB7 284 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 RPL3LQ92901 407 aaKnown RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 MAGEB10Q96LZ2 347 aaPredicted RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 CENPOQ9BU64 300 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 KLHL31Q9H511 634 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 IL1RAPQ9NPH3 570 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 WWOXQ9NZC7 414 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 EHD3Q9NZN3 535 aa9.96□□□□□ -0.81
DDX56-212ENST00000485367 POLR3HQ9Y535 204 aaPredicted RBP9.96□□□□□ -0.81
DDX56-212ENST00000485367 A0A075B6Q4 140 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 A0A096LPI6 279 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 B4GALT2O60909 372 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 SEMA7AO75326 666 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 PGRP06401 933 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 FHP07954 510 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 C1GALT1C1LP0DN25 315 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 ITGA2P17301 1181 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 IL32P24001 234 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 SLC6A12P48065 614 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 GZMMP51124 257 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 DAPP51397 102 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 DGKQP52824 942 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 ELOAQ14241 798 aaKnown RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 ABRAXAS2Q15018 415 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 NSDHLQ15738 373 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 TIGD6Q17RP2 521 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 BTBD16Q32M84 506 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 FBXO48Q5FWF7 155 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 ANKRD34AQ69YU3 496 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 METTL2BQ6P1Q9 378 aaKnown RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 SLCO4C1Q6ZQN7 724 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 VN1R5Q7Z5H4 357 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 P3H2Q8IVL5 708 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 FAM83FQ8NEG4 500 aaPredicted RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 GRHL3Q8TE85 626 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 UTP15Q8TED0 518 aaKnown RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 FAM120BQ96EK7 910 aaKnown RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 OR1F2PQ96R84 312 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 CPPED1Q9BRF8 314 aaPredicted RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 DPY30Q9C005 99 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.96□□□□□ -0.82
DDX56-212ENST00000485367 C3orf14Q9HBI5 128 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 LANCL2Q9NS86 450 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 EXD2Q9NVH0 621 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 STMN3Q9NZ72 180 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 CD274Q9NZQ7 290 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 RPS6KA6Q9UK32 745 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 CFL2Q9Y281 166 aa9.96□□□□□ -0.82
DDX56-212ENST00000485367 CAB39Q9Y376 341 aaPredicted RBP9.96□□□□□ -0.82
DDX56-212ENST00000485367 CPAMD8Q8IZJ3 1885 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 ANKUB1A6NFN9 424 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 URADA6NGE7 173 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 HMX3A6NHT5 357 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 CYSRT1A8MQ03 144 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 TAPBPO15533 448 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 MITFO75030 526 aaPredicted RBP9.95□□□□□ -0.82
DDX56-212ENST00000485367 MFN2O95140 757 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 LCKP06239 509 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 YES1P07947 543 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 LIPAP38571 399 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 PIK3CBP42338 1070 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 SLC15A1P46059 708 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 HSPA7P48741 367 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 AGTR2P50052 363 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 RHAGQ02094 409 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 ZNF33BQ06732 778 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 GPR50Q13585 617 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 SLBPQ14493 270 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDX56-212ENST00000485367 ABHD17BQ5VST6 288 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 PLAG1Q6DJT9 500 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 LETMD1Q6P1Q0 360 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 FAHD1Q6P587 224 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 SCIMPQ6UWF3 145 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 MSANTD1Q6ZTZ1 278 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 MSRB3Q8IXL7 192 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 KLHDC8AQ8IYD2 350 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 TCAIMQ8N3R3 496 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 TMEM132CQ8N3T6 1108 aa9.95□□□□□ -0.82
DDX56-212ENST00000485367 NATD1Q8N6N6 113 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms