RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 TADA1Q96BN2 335 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 NUS1Q96E22 293 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TRNT1Q96Q11 434 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 MTMR9Q96QG7 549 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 LRRC1Q9BTT6 524 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SF3B5Q9BWJ5 86 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TEKT3Q9BXF9 490 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RBM38Q9H0Z9 239 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 CSTL1Q9H114 145 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SLITRK2Q9H156 845 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 NXF5Q9H1B4 397 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 FNDC4Q9H6D8 234 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RANBP3Q9H6Z4 567 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 LYRM4Q9HD34 91 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 NRN1Q9NPD7 142 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 SLC17A5Q9NRA2 495 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TUBG2Q9NRH3 451 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 MAN2C1Q9NTJ4 1040 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 TEX10Q9NXF1 929 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 AHSPQ9NZD4 102 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 STOX2Q9P2F5 926 aaPredicted RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 GALPQ9UBC7 116 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RALYQ9UKM9 306 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 PRPF19Q9UMS4 504 aaKnown RBP3.88□□□□□ -1.79
PTCD3-214ENST00000483925 RASD1Q9Y272 281 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 PEX16Q9Y5Y5 336 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 ALG6Q9Y672 507 aa3.88□□□□□ -1.79
PTCD3-214ENST00000483925 IGLV5-45A0A087WSX0 123 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 A0A0A6YYD4 124 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 SMCO2A6NFE2 343 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 TMCO5BA8MYB1 307 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 F5H6K3 240 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 BCKDKO14874 412 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 CLOCKO15516 846 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 PRKAB2O43741 272 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 SRPX2O60687 465 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 IGHV4-39P01824 125 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 UMPSP11172 480 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 PRPS2P11908 318 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 HPGDP15428 266 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 RPL35AP18077 110 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 GTF2E2P29084 291 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 HNRNPH3P31942 346 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 CDH5P33151 784 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ZFP36L2P47974 494 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 UQCRFS1P47985 274 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 HOXA1P49639 335 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 KLRC3Q07444 240 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF74Q16587 644 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 VPS26BQ4G0F5 336 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 RUSC1-AS1Q66K80 236 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 LEKR1Q6ZMV7 388 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ERI1Q8IV48 349 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ST13P4Q8IZP2 240 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 KIRREL3Q8IZU9 778 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ZSCAN4Q8NAM6 433 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 SMRP1Q8NCR6 262 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 OR1L6Q8NGR2 347 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 OR13C9Q8NGT0 318 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 C16orf52Q8NHV5 167 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 NDNFQ8TB73 568 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ACMSDQ8TDX5 336 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 AENQ8WTP8 325 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 NRGNQ92686 78 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 CERS2Q96G23 380 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF479Q96JC4 524 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 C8orf76Q96K31 380 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 NKX3-1Q99801 234 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 TMEM175Q9BSA9 504 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 RHNO1Q9BSD3 238 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 DUSP16Q9BY84 665 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ROGDIQ9GZN7 287 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 GAL3ST2Q9H3Q3 398 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 CCNB1IP1Q9NPC3 277 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 PXMP2Q9NR77 195 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 RCOR3Q9P2K3 495 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 ZNF221Q9UK13 617 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 EXOSC1Q9Y3B2 195 aaKnown RBP3.87□□□□□ -1.79
PTCD3-214ENST00000483925 GRIN2DO15399 1336 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 CGNL1Q0VF96 1302 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 FRMPD4Q14CM0 1322 aa3.87□□□□□ -1.79
PTCD3-214ENST00000483925 TAF1P21675 1872 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 ASPDHA6ND91 283 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 OR5H15A6NDH6 313 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 PDZK1P1A8MUH7 402 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 P2RY10O00398 339 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 TNFRSF13BO14836 293 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-214ENST00000483925 SIGLEC5O15389 551 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 HBQ1P09105 142 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 ALOX5P09917 674 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 NEFHP12036 1026 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 CCNOP22674 350 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 STOMP27105 288 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 CD80P33681 288 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 GPR4P46093 362 aa3.86□□□□□ -1.79
PTCD3-214ENST00000483925 OR3A2P47893 321 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms