RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GDF1P27539 372 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 GSK3BP49841 420 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 ALDH6A1Q02252 535 aaKnown RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 RBBP4Q09028 425 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 TIGD3Q6B0B8 471 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 PLCZ1Q86YW0 608 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 PEX5LQ8IYB4 626 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF843Q8N446 348 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 TMCO5AQ8N6Q1 288 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 FAM156AQ8NDB6 213 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 OR52P1PQ8NH57 321 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 WDR60Q8WVS4 1066 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 SDHAF3Q9NRP4 125 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 NDE1Q9NXR1 346 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 TMEM181Q9P2C4 612 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CARD8Q9Y2G2 431 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CFAP46Q8IYW2 2715 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 A0A1W2PQD3 144 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 H3BNH8 94 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 OIP5O43482 229 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 HCRTR2O43614 444 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 WISP2O76076 250 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 GUSBP08236 651 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CELA3AP09093 270 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 UBTFL6P0CB48 400 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 TCN1P20061 433 aaPredicted RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 ELAVL4P26378 380 aaKnown RBP16.26■□□□□ 0.19
CPNE1-224ENST00000483359 PCGF2P35227 344 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF117Q03924 483 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 C17orf67Q0P5P2 114 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CBLN3Q6UW01 205 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 SLC22A16Q86VW1 577 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 OR4K17Q8NGC6 315 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CPT1CQ8TCG5 803 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 NTNG2Q96CW9 530 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 CDRT15Q96T59 188 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 SPATA9Q9BWV2 254 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 BCL2L10Q9HD36 194 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 OLAHQ9NV23 265 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 B4GALT7Q9UBV7 327 aa16.26■□□□□ 0.19
CPNE1-224ENST00000483359 PRORSD1PA6NEY8 169 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 GTPBP1O00178 669 aaKnown RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 GLSO94925 669 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 CSTAP01040 98 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 DBIP07108 87 aaKnown RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 UBL4AP11441 157 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 CCR4P51679 360 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 FGFBP1Q14512 234 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 C6orf89Q6UWU4 347 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF836Q6ZNA1 936 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 METTL25Q8N6Q8 603 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 KCTD14Q9BQ13 255 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 DEFB127Q9H1M4 99 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 DSN1Q9H410 356 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 CACYBPQ9HB71 228 aaKnown RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 RLIMQ9NVW2 624 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF443Q9Y2A4 671 aaPredicted RBP16.25■□□□□ 0.19
CPNE1-224ENST00000483359 C15orf41Q9Y2V0 281 aa16.25■□□□□ 0.19
CPNE1-224ENST00000483359 COL6A6A6NMZ7 2263 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 ELOVL7A1L3X0 281 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 NPIPA5E9PKD4 350 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 SUV39H1O43463 412 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 CDC40O60508 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 TRAPPC6AO75865 159 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 PDE9AO76083 593 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 CRYABP02511 175 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 RPS4Y1P22090 263 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 MST1P26927 711 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 MSX2P35548 267 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 KCNJ10P78508 379 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF311Q5JNZ3 666 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 PRAMEF8Q5VWM4 474 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 PRAMEF7Q5VXH5 474 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 BNC2Q6ZN30 1099 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 KRT73Q86Y46 540 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 MICU2Q8IYU8 434 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 FAR1Q8WVX9 515 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 KLHDC3Q9BQ90 382 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 TAS2R1Q9NYW7 299 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 SUCOQ9UBS9 1254 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 NPIPA1Q9UND3 350 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 RRP9O43818 475 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 GCM2O75603 506 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 PABPC4LP0CB38 370 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 NID1P14543 1247 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 EEFSECP57772 596 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 PLAURQ03405 335 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 LIN52Q52LA3 116 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 MRPL2Q5T653 305 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 ERICH5Q6P6B1 374 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 EIF3MQ7L2H7 374 aaKnown RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 MISPQ8IVT2 679 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 FAM109AQ8N4B1 249 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 SMYD1Q8NB12 490 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 FIG4Q92562 907 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 NR4A3Q92570 626 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 ZNF607Q96SK3 696 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 AGPAT4Q9NRZ5 378 aa16.24■□□□□ 0.19
CPNE1-224ENST00000483359 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.24■□□□□ 0.19
CPNE1-224ENST00000483359 SEC14L3Q9UDX4 400 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms